RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CSN3P07498 182 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 SLC25A6P12236 298 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 NPY1RP25929 384 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 ADMP35318 185 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 INSL3P51460 131 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 MFAP4P55083 255 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 PVRIGQ6DKI7 326 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 UNQ9165/PRO28630Q6UXU0 137 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 ZNF431Q8TF32 576 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-222ENST00000478095 CACNG8Q8WXS5 425 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 PRR25Q96S07 402 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 MRPL36Q9P0J6 103 aaKnown RBP7.82□□□□□ -1.16
HDAC6-222ENST00000478095 PEMTQ9UBM1 199 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 CACFD1Q9UGQ2 172 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 SELENOKQ9Y6D0 94 aa7.82□□□□□ -1.16
HDAC6-222ENST00000478095 CORTO00230 105 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 GNG7O60262 68 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 SCGB1D2O95969 90 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 CTSGP08311 255 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 SPNP16150 400 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 DEFA1P59665 94 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 DEFA3P59666 94 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 IAH1Q2TAA2 248 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-222ENST00000478095 FAM106AQ4KMX7 169 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 C2orf83Q53S99 150 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 ADAMTSL5Q6ZMM2 481 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 REC114Q7Z4M0 266 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 GPHB5Q86YW7 130 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 OR10C1Q96KK4 312 aa7.81□□□□□ -1.16
HDAC6-222ENST00000478095 PAIP2BQ9ULR5 123 aaKnown RBP7.81□□□□□ -1.16
HDAC6-222ENST00000478095 C2orf70A6NJV1 201 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 FAM90A26D6RGX4 464 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 K7EIL1 84 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 WRBO00258 174 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
HDAC6-222ENST00000478095 SYNGR2O43760 224 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 IGLV1-51P01701 117 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 NPBWR1P48145 328 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 POLR2GP62487 172 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC6-222ENST00000478095 TM4SF20Q53R12 229 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 SPSB3Q6PJ21 355 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 C12orf45Q8N5I9 185 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-222ENST00000478095 DUSP18Q8NEJ0 188 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 OR4D5Q8NGN0 318 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 DYNLRB2Q8TF09 96 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 TXN2Q99757 166 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 C20orf24Q9BUV8 137 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 GSKIPQ9P0R6 139 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-222ENST00000478095 U3KQ87 197 aa7.8□□□□□ -1.16
HDAC6-222ENST00000478095 RPS10-NUDT3A0A1W2PQS6 291 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 TMEM213A2RRL7 107 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 C15orf62A8K5M9 175 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 INMT-MINDY4F8WBC2 141 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 H3BP45 60 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 LGALS9O00182 355 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 NDUFA4O00483 81 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 ZNF207O43670 478 aaKnown RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 SSSCA1O60232 199 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 MED6O75586 246 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 YIF1AO95070 293 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 IFNA4P05014 189 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 FOLR2P14207 255 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 FCGR2BP31994 310 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 NKX2-1P43699 371 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 RND2P52198 227 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 ZBTB8BQ8NAP8 495 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 RNASEH2CQ8TDP1 164 aaKnown RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 TMEM190Q8WZ59 177 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 ZNF414Q96IQ9 312 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 ATP6V0BQ99437 205 aa7.79□□□□□ -1.16
HDAC6-222ENST00000478095 ZNF436Q9C0F3 470 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 GAR1Q9NY12 217 aaKnown RBP7.79□□□□□ -1.16
HDAC6-222ENST00000478095 IZUMO1RA6ND01 250 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 C5orf51A6NDU8 294 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 A8MWP6 167 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 CLN5O75503 358 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 TMEM50AO95807 157 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 IL5P05113 134 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 CBLN1P23435 193 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 ID3Q02535 119 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 RELQ04864 619 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-222ENST00000478095 CD300EQ496F6 205 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-222ENST00000478095 DEFB121Q5J5C9 76 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 SPANXN5Q5MJ07 72 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 PRSS54Q6PEW0 395 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 BTNL8Q6UX41 500 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 SLC16A13Q7RTY0 426 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 NOXA1Q86UR1 476 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 OR4X1Q8NH49 305 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 ACY3Q96HD9 319 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 CIB3Q96Q77 187 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-222ENST00000478095 GPN1Q9HCN4 374 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-222ENST00000478095 PALMDQ9NP74 551 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 SIGLEC8Q9NYZ4 499 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 ZMAT5Q9UDW3 170 aaKnown RBP7.78□□□□□ -1.16
HDAC6-222ENST00000478095 UFC1Q9Y3C8 167 aa7.78□□□□□ -1.16
HDAC6-222ENST00000478095 SLC25A4P12235 298 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms