RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SSX2Q16385 188 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 COA6Q5JTJ3 125 aaKnown RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 CST9LP1Q5W188 147 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 MIC13Q5XKP0 118 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 SLC25A48Q6ZT89 311 aaKnown RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TCF23Q7RTU1 214 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 VKORC1L1Q8N0U8 176 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 LYG1Q8N1E2 194 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF383Q8NA42 475 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 OR51G1Q8NGK1 321 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 OR10D4PQ8NGN7 298 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 OR2T10Q8NGZ9 312 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 OR4X1Q8NH49 305 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 ABHD5Q8WTS1 349 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM170AQ8WVE7 144 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 CFHR4Q92496 578 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 NEUROG1Q92886 237 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 ACY3Q96HD9 319 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 SLC35E1Q96K37 410 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 UHRF2Q96PU4 802 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 PFDN5Q99471 154 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 GAL3ST2Q9H3Q3 398 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 PLEKHA3Q9HB20 300 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 SEPSECSQ9HD40 501 aaKnown RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 SLC35D1Q9NTN3 355 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 FKBP11Q9NYL4 201 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 BET1LQ9NYM9 111 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 SLC25A10Q9UBX3 287 aaPredicted RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 RPUSD1Q9UJJ7 312 aaKnown RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 OR51B2Q9Y5P1 312 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 PLCE1Q9P212 2302 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 PDZD2O15018 2839 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 CELSR1Q9NYQ6 3014 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TRAV9-1A0A075B6T8 112 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 A0A1W2PPQ1 181 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 A0A1W2PRX2 142 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 LINC00587B1AMM8 73 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 B5MCH6 92 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C16orf97H3BN30 126 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 MKRN2OSH3BPM6 223 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 J3QR06 171 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 ACTL6BO94805 426 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 CA2P00918 260 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 IGHV2-70P01814 119 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 SOD3P08294 240 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 RNF224P0DH78 156 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 SELLP14151 372 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 AREGP15514 252 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 NPPCP23582 126 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 GCHFRP30047 84 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 UQCRFS1P47985 274 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 ATP5G3P48201 142 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 GNG10P50151 68 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PTTG1IPP53801 180 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 UBE2G2P60604 165 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PRCDQ00LT1 54 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 FAM27E3Q08E93 113 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 RNF151Q2KHN1 245 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C2orf83Q53S99 150 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PYY3Q5JQD4 70 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 GCSAMLQ5JQS6 135 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 ACTL10Q5JWF8 245 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 FAM201AQ5SY85 155 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 FAM71F2Q6NXP2 309 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C1orf122Q6ZSJ8 110 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF833PQ6ZTB9 187 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM144Q7Z5S9 345 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 LINC01551Q86U37 167 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 RPRMLQ8N4K4 120 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 FAM216BQ8N7L0 139 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 NECAP1Q8NC96 275 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 DEFB108BQ8NET1 73 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 OR1L8Q8NGR8 309 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 OR1P1Q8NH06 330 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 OR5B3Q8NH48 314 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 OSR1Q8TAX0 266 aaPredicted RBP4.01□□□□□ -1.77
SF3B6-202ENST00000478050 LEAP2Q969E1 77 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C11orf52Q96A22 123 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 CCL13Q99616 98 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 VKORC1Q9BQB6 163 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PCGF1Q9BSM1 259 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 C19orf24Q9BVV8 132 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 GPR61Q9BZJ8 451 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PATZ1Q9HBE1 687 aaKnown RBP4.01□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM167BQ9NRX6 74 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 AURKAIP1Q9NWT8 199 aaPredicted RBP4.01□□□□□ -1.77
SF3B6-202ENST00000478050 TP53TG5Q9Y2B4 290 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 LY96Q9Y6Y9 160 aa4.01□□□□□ -1.77
SF3B6-202ENST00000478050 PPIAL4EA0A075B759 164 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 TEX50A0A1B0GTY4 177 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 A0A1W2PN81 502 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 XKRY2A2RUG3 117 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 C9JCJ5 164 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PPIAL4DF5H284 164 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 INS-IGF2F8WCM5 200 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms