RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 STAG3L3P0CL85 134 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SONP18583 2426 aaKnown RBP-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SMAGPQ0VAQ4 97 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SPATA45Q537H7 98 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 KHDC3LQ587J8 217 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 C5orf46Q6UWT4 87 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 TMCO2Q7Z6W1 182 aaPredicted RBP-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SIGLECL1Q8N7X8 197 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 LINC00301Q8NCQ3 95 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 OR5A1Q8NGJ0 315 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SLC37A2Q8TED4 501 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SMIM12Q96EX1 92 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 DERL1Q9BUN8 251 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 LPAR5Q9H1C0 372 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 EFCAB1Q9HAE3 211 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 TP73-AS1Q9UF72 201 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 NBPF19A0A087WUL8 3843 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 SVEP1Q4LDE5 3571 aa-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 USP9YO00507 2555 aaPredicted RBP-1.02□□□□□ -2.57
NCKAP1-204ENST00000477988 RYR2Q92736 4967 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 KIF13BQ9NQT8 1826 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 COL24A1Q17RW2 1714 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 BIRC6Q9NR09 4857 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 LAMA2P24043 3122 aaKnown RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 EPG5Q9HCE0 2579 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 A0A0D9SG52 128 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 JMJD7-PLA2G4BH0Y9G9 81 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 AZIN1O14977 448 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 PPYP01298 95 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 NQO2P16083 231 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 RNASE4P34096 147 aaKnown RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 UBE2KP61086 200 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 CCL20P78556 96 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 JOSD1Q15040 202 aaPredicted RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 GUK1Q16774 197 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 C18orf21Q32NC0 220 aaPredicted RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 AADACL3Q5VUY0 350 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 ST6GALNAC3Q8NDV1 305 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 TERB2Q8NHR7 220 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 CCDC12Q8WUD4 166 aaPredicted RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 MED10Q9BTT4 135 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 NSRP1Q9H0G5 558 aaKnown RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 HSPB8Q9UJY1 196 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 RNF11Q9Y3C5 154 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 V9GYY5 206 aaPredicted RBP-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 MYLKQ15746 1914 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 TANC1Q9C0D5 1861 aa-1.03□□□□□ -2.57
NCKAP1-204ENST00000477988 TEP1Q99973 2627 aaKnown RBP-1.03□□□□□ -2.58
NCKAP1-204ENST00000477988 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.03□□□□□ -2.58
NCKAP1-204ENST00000477988 CTTNBP2Q8WZ74 1663 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 HECW1Q76N89 1606 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 SPTBN2O15020 2390 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 MED1Q15648 1581 aaPredicted RBP-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 ARHGEF11O15085 1522 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 RFX7Q2KHR2 1363 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 ATRQ13535 2644 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 PTPRDP23468 1912 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 TEX50A0A1B0GTY4 177 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 A0A1B0GW15 77 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 OR4C45A6NMZ5 311 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 INMT-MINDY4F8WBC2 141 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 AHSA1O95433 338 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 LDOC1O95751 146 aaPredicted RBP-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 CST4P01036 141 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 SERPINB9P50453 376 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 RAB8AP61006 207 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 CXCR4P61073 352 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 C4orf26Q17RF5 130 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 NKAIN1Q4KMZ8 207 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 SPANXN3Q5MJ09 141 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 ZCCHC23Q6ZST2 131 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 MIR17HGQ75NE6 70 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 CLVS1Q8IUQ0 354 aaPredicted RBP-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 BLIDQ8IZY5 108 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 OR8D4Q8NGM9 314 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 OR5AK3PQ8NH89 298 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 STOML3Q8TAV4 291 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 TEX47Q8TBZ9 253 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 ROPN1LQ96C74 230 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 PLEKHB2Q96CS7 222 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 IMP4Q96G21 291 aaKnown RBP-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 WFDC10AQ9H1F0 79 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 OR51V1Q9H2C8 321 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 C14orf132Q9NPU4 83 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 MYO7AQ13402 2215 aa-1.04□□□□□ -2.58
NCKAP1-204ENST00000477988 A0A0J9YY10 115 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 A0A1B0GX78 115 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 DAPL1A0PJW8 107 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 H3BRM9 83 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 BRI3O95415 125 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 STAG3L2P0CL84 134 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 MAP3K7CLP57077 242 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 ESRGQ1W209 222 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 SPINK13Q1W4C9 94 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 C1orf194Q5T5A4 169 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 GLT8D1Q68CQ7 371 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 AGR3Q8TD06 166 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 EEF1AKMT1Q8WVE0 214 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 GPR146Q96CH1 333 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms