RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZMAT5Q9UDW3 170 aaKnown RBP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 ZNF256Q9Y2P7 627 aaPredicted RBP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 RNF222A6NCQ9 220 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 CGB1A6NKQ9 187 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 UPK2O00526 184 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 TAAR5O14804 337 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 BCL2L11O43521 198 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 TSC22D2O75157 780 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 SCAF4O95104 1147 aaKnown RBP6.34□□□□□ -1.39
HDAC6-221ENST00000477561 BRI3O95415 125 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 IFNA17P01571 189 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 IGHV3-23P01764 117 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 RPL12P30050 165 aaKnown RBP6.34□□□□□ -1.39
HDAC6-221ENST00000477561 MAS1LP35410 378 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 INSL3P51460 131 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 AP2S1P53680 142 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-221ENST00000477561 SYNJ2BPP57105 145 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 SPCS3P61009 180 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 RPP30P78346 268 aaKnown RBP6.34□□□□□ -1.39
HDAC6-221ENST00000477561 TNFRSF9Q07011 255 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 CD69Q07108 199 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 BAXQ07812 192 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 EXOSC2Q13868 293 aaKnown RBP6.34□□□□□ -1.39
HDAC6-221ENST00000477561 IZUMO4Q1ZYL8 232 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 AARDQ4LEZ3 155 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 ZNF343Q6P1L6 599 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 ZNF429Q86V71 674 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 USMG5Q96IX5 58 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 SMIM8Q96KF7 97 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 OR4C12Q96R67 309 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 MAGT1Q9H0U3 335 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 S4R3C0 116 aa6.34□□□□□ -1.39
HDAC6-221ENST00000477561 TRBV9A0A0B4J1U6 114 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 FAM223BA6NKX1 122 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 C15orf61A6NNL5 157 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 CEBPZOSA8MTT3 80 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 PPP5D1E7EU14 171 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 NXPH3O95157 252 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 NDUFB8O95169 186 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 FGF2P09038 288 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 DEFA4P12838 97 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 ZP3P21754 424 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 CAV2P51636 162 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 OR2B8PP59922 312 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 EIF5AP63241 154 aaKnown RBP6.33□□□□□ -1.4
HDAC6-221ENST00000477561 KLF5Q13887 457 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-221ENST00000477561 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 C15orf32Q32M92 178 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 SLC51BQ86UW2 128 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 STX12Q86Y82 276 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 FAM223AQ8IWN6 122 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 NECAP1Q8NC96 275 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 OR10W1Q8NGF6 305 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 OR5B3Q8NH48 314 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 DTD1Q8TEA8 209 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 ELOVL1Q9BW60 279 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 QTRT1Q9BXR0 403 aaKnown RBP6.33□□□□□ -1.4
HDAC6-221ENST00000477561 COMMD5Q9GZQ3 224 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 HIPK2Q9H2X6 1198 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 RBKSQ9H477 322 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 C11orf1Q9H5F2 150 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 ENY2Q9NPA8 101 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 LYRM2Q9NU23 88 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-221ENST00000477561 TMEM14BQ9NUH8 114 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 PSENENQ9NZ42 101 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 FBXL7Q9UJT9 491 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF257Q9Y2Q1 563 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 LSM4Q9Y4Z0 139 aaKnown RBP6.33□□□□□ -1.4
HDAC6-221ENST00000477561 TNCP24821 2201 aa6.33□□□□□ -1.4
HDAC6-221ENST00000477561 TEX50A0A1B0GTY4 177 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 NPIPB5A8MRT5 1133 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 J3QL48 77 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 BMPR1BO00238 502 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 CRYGCP07315 174 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 IAPPP10997 89 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 CTRB1P17538 263 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 HOXA1P49639 335 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-221ENST00000477561 HSPE1P61604 102 aaKnown RBP6.32□□□□□ -1.4
HDAC6-221ENST00000477561 EWSR1Q01844 656 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC6-221ENST00000477561 CTRB2Q6GPI1 263 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 TMEM252Q8N6L7 170 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 OR9G4Q8NGQ1 327 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 ASCL2Q99929 193 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 B9D2Q9BPU9 175 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 HINT2Q9BX68 163 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 OR51B2Q9Y5P1 312 aa6.32□□□□□ -1.4
HDAC6-221ENST00000477561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.31□□□□□ -1.4
HDAC6-221ENST00000477561 BORCS7-ASMTA0A0B4J1R7 106 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 IGLC7A0M8Q6 106 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 FAM24AA6NFZ4 105 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 RGS13O14921 159 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 DFFBO76075 338 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 JTBO76095 146 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 OR2C1O95371 312 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 IFNA7P01567 189 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 TPT1P13693 172 aaKnown RBP6.31□□□□□ -1.4
HDAC6-221ENST00000477561 GP9P14770 177 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms