RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 VWFP04275 2813 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 A0A087WW49 117 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.52
SEC13-215ENST00000477547 TRBV7-1A0A0A6YYK4 115 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 TRBV12-3P01733 135 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 PF4P02776 101 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 RLN2P04090 185 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 METTL15P1P0C7V9 234 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 GPR183P32249 361 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 RAP2BP61225 183 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 Q56UQ5 140 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 FAM209BQ5JX69 171 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 ACSM6Q6P461 480 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 TMEM14EPQ6UXP3 125 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 MBD2Q9UBB5 411 aa11.83□□□□□ -0.52
SEC13-215ENST00000477547 E5RGE8 158 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 H0YIZ8 118 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 CCNKO75909 580 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 CD69Q07108 199 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 ZNF616Q08AN1 781 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 ETFRF1Q6IPR1 90 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 PRSS54Q6PEW0 395 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
SEC13-215ENST00000477547 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
SEC13-215ENST00000477547 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
SEC13-215ENST00000477547 TRAV14DV4A0A0A6YYC5 116 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 CCL24O00175 119 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 SLC25A4P12235 298 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 ARL3P36405 182 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 MFAP4P55083 255 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 FHL3Q13643 280 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 ACOT7LQ6ZUV0 252 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 STX12Q86Y82 276 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 DPF1Q92782 380 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 SLC35E1Q96K37 410 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
SEC13-215ENST00000477547 MRPL36Q9P0J6 103 aaKnown RBP11.81□□□□□ -0.52
SEC13-215ENST00000477547 IGSF23A1L1A6 192 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 PRSS46E5RG02 174 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
SEC13-215ENST00000477547 LINC01619G3V211 115 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 BMPR1BO00238 502 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 GNG7O60262 68 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 HSPB1P04792 205 aaKnown RBP11.8□□□□□ -0.52
SEC13-215ENST00000477547 P2RY1P47900 373 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 RND2P52198 227 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 FGL1Q08830 312 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 OR2T35Q8NGX2 323 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 THAP6Q8TBB0 222 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 DCUN1D4Q92564 292 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 BSCL2Q96G97 398 aaPredicted RBP11.8□□□□□ -0.52
SEC13-215ENST00000477547 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 ATP6V0BQ99437 205 aa11.8□□□□□ -0.52
SEC13-215ENST00000477547 RANGRFQ9HD47 186 aaPredicted RBP11.8□□□□□ -0.52
SEC13-215ENST00000477547 GAR1Q9NY12 217 aaKnown RBP11.8□□□□□ -0.52
SEC13-215ENST00000477547 A0A1B0GVG6 124 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 PMS2P5A8MQ11 134 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 TGOLN2O43493 480 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 CST7O76096 145 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 SCAF4O95104 1147 aaKnown RBP11.79□□□□□ -0.52
SEC13-215ENST00000477547 ZP3P21754 424 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
SEC13-215ENST00000477547 FCGR2BP31994 310 aaPredicted RBP11.79□□□□□ -0.52
SEC13-215ENST00000477547 MYCNOSP40205 109 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 NPBWR1P48145 328 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 SLURP1P55000 103 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 MLANAQ16655 118 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 TMEM252Q8N6L7 170 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 TXN2Q99757 166 aa11.79□□□□□ -0.52
SEC13-215ENST00000477547 GGCTO75223 188 aaKnown RBP11.78□□□□□ -0.52
SEC13-215ENST00000477547 SCGB2A1O75556 95 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 CLEC3BP05452 202 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 GPX4P36969 197 aaPredicted RBP11.78□□□□□ -0.52
SEC13-215ENST00000477547 SULT1A1P50225 295 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 DLK1P80370 383 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC13-215ENST00000477547 AKR1C1Q04828 323 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 SLC38A11Q08AI6 406 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 SPSB3Q6PJ21 355 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 TMEM217Q8N7C4 229 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 OR4X1Q8NH49 305 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 CACNG8Q8WXS5 425 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 RNF126Q9BV68 326 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 SLC25A31Q9H0C2 315 aa11.78□□□□□ -0.52
SEC13-215ENST00000477547 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 SMCO3A2RU48 225 aa11.77□□□□□ -0.53
SEC13-215ENST00000477547 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
SEC13-215ENST00000477547 CLN5O75503 358 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms