RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TSPAN5P62079 268 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
BRCA1-214ENST00000477152 MXD1Q05195 221 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 ZNF773Q6PK81 442 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 DHRS11Q6UWP2 260 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 H2BFWTQ7Z2G1 175 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 DUSP18Q8NEJ0 188 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 MOB3AQ96BX8 217 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 ZNF2Q9BSG1 426 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-214ENST00000477152 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 VCX3AQ9NNX9 186 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 RYR2Q92736 4967 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 IGHV7-4-1A0A0J9YVY3 117 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 LOC100506127A0A0U1RQW1 187 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 A0A1B0GW64 132 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 CGB1A6NKQ9 187 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 CORTO00230 105 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 PGLYRP1O75594 196 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-214ENST00000477152 KRASP01116 189 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 RLN1P04808 185 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 SNCAP37840 140 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 UBE2NLQ5JXB2 153 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 TMEM69Q5SWH9 247 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 C19orf35Q6ZS72 473 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 GVQW1Q8N7I0 195 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 OR10W1Q8NGF6 305 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 RHPN1-AS1Q9BWJ2 59 aa5.36□□□□□ -1.55
BRCA1-214ENST00000477152 C11orf68Q9H3H3 251 aaKnown RBP5.36□□□□□ -1.55
BRCA1-214ENST00000477152 TRAV3A0A0B4J244 114 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 GNRHRP30968 328 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 PRSS3P35030 304 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 WT1-ASQ06250 92 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 TMEM187Q14656 261 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 KCTD21Q4G0X4 260 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 TMEM88Q6PEY1 159 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 SLC25A46Q96AG3 418 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 GRAMD2BQ96HH9 432 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 ENY2Q9NPA8 101 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 SELENOKQ9Y6D0 94 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 C15orf61A6NNL5 157 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 CHEK1O14757 476 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 ST8SIA3O43173 380 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 G6PCP35575 357 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 ODF3L2Q3SX64 289 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 ANXA2RQ3ZCQ2 193 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 MORN3Q6PF18 240 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-214ENST00000477152 STHQ8IWL8 128 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 OR11H2Q8NH07 326 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 OR10C1Q96KK4 312 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 NXF2Q9GZY0 626 aaKnown RBP5.35□□□□□ -1.55
BRCA1-214ENST00000477152 FBXL17Q9UF56 701 aa5.35□□□□□ -1.55
BRCA1-214ENST00000477152 CTSGP08311 255 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 TFPI2P48307 235 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 ZNF600Q6ZNG1 722 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 TCF24Q7RTU0 167 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 ZNF114Q8NC26 417 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 OR5H6Q8NGV6 325 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 FCAMRQ8WWV6 532 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 SLC25A38Q96DW6 304 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 CHRDL1Q9BU40 450 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 SCPEP1Q9HB40 452 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 TMEM14BQ9NUH8 114 aa5.34□□□□□ -1.55
BRCA1-214ENST00000477152 TRAV30A0A087WSZ9 112 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 ANKRD65E5RJM6 399 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 K7EIM0 57 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 ZNF207O43670 478 aaKnown RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 PMP2P02689 132 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 SPP1P10451 314 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 NPPCP23582 126 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 RFX2P48378 723 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 HSPE1P61604 102 aaKnown RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 PRCDQ00LT1 54 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 FHL2Q14192 279 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 BAK1Q16611 211 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 APRG1Q8IVJ8 170 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 SLC35G3Q8N808 338 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 PINX1Q96BK5 328 aaKnown RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 METTL26Q96S19 204 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 RNF2Q99496 336 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 CACFD1Q9UGQ2 172 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 LYSTQ99698 3801 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 IGHV3-21A0A0B4J1V1 117 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 RPS10-NUDT3A0A1W2PQS6 291 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 MEIS3P1A6NDR6 274 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 B3GALNT1O75752 331 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 MT-CO2P00403 227 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 FCER2P06734 321 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 PTHLHP12272 177 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 AP2S1P53680 142 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 TAS2R20P59543 309 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 NUTF2P61970 127 aaKnown RBP5.33□□□□□ -1.56
BRCA1-214ENST00000477152 SAMD12Q8N8I0 201 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 C15orf40Q8WUR7 153 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms