RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 VAMP1P23763 118 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 SURF2Q15527 256 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 ZNF124Q15973 351 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 LILRB2Q8N423 598 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 DUSP18Q8NEJ0 188 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 RBPMSQ93062 196 aaKnown RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 TMEM230Q96A57 120 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 GPR146Q96CH1 333 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 PRRT1Q99946 306 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 FNDC4Q9H6D8 234 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 RABL2AQ9UBK7 228 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-213ENST00000476930 RABL2BQ9UNT1 228 aa8.28□□□□□ -1.08
PTPRN-213ENST00000476930 IGHV3-66A0A0C4DH42 116 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 LCE6AA0A183 80 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 A0A1B0GU03 582 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 FABP12A6NFH5 140 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 OR4C46A6NHA9 309 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 NOL3O60936 208 aaKnown RBP8.27□□□□□ -1.09
PTPRN-213ENST00000476930 NPBWR1P48145 328 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 TFPI2P48307 235 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 SUB1P53999 127 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTPRN-213ENST00000476930 SPCS3P61009 180 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 DHODHQ02127 395 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 BSXQ3C1V8 233 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 AARDQ4LEZ3 155 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 TMEM268Q5VZI3 342 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 FAM90A2PQ658T7 463 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 MCFD2Q8NI22 146 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 ST8SIA2Q92186 375 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 ENY2Q9NPA8 101 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.27□□□□□ -1.09
PTPRN-213ENST00000476930 CACNG5Q9UF02 275 aa8.27□□□□□ -1.09
PTPRN-213ENST00000476930 RSL24D1Q9UHA3 163 aaKnown RBP8.27□□□□□ -1.09
PTPRN-213ENST00000476930 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTPRN-213ENST00000476930 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 NXPH3O95157 252 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 RPL35AP18077 110 aaKnown RBP8.26□□□□□ -1.09
PTPRN-213ENST00000476930 OPRK1P41145 380 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 TMEM187Q14656 261 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 ZNF600Q6ZNG1 722 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 FAM219AQ8IW50 185 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 OR52E5Q8NH55 327 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 MCUBQ9NWR8 336 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 TMEM56-RWDD3S4R434 201 aa8.26□□□□□ -1.09
PTPRN-213ENST00000476930 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 CORTO00230 105 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 CLN5O75503 358 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 AKR1C4P17516 323 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 SUPT4H1P63272 117 aaKnown RBP8.25□□□□□ -1.09
PTPRN-213ENST00000476930 DEFB135Q30KP9 77 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 TCF24Q7RTU0 167 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 OR4X1Q8NH49 305 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 TMEM170AQ8WVE7 144 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 GINS3Q9BRX5 216 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 VSIRQ9H7M9 311 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 HEYLQ9NQ87 328 aaPredicted RBP8.25□□□□□ -1.09
PTPRN-213ENST00000476930 SCP2D1Q9UJQ7 156 aa8.25□□□□□ -1.09
PTPRN-213ENST00000476930 CEBPZOSA8MTT3 80 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 SPRY2O43597 315 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 DFFBO76075 338 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 IGKV1-17P01599 117 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 HTR2BP41595 481 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 APOC4P55056 127 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPRN-213ENST00000476930 KLF9Q13886 244 aaPredicted RBP8.24□□□□□ -1.09
PTPRN-213ENST00000476930 TIGITQ495A1 244 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 GALNT14Q96FL9 552 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 KCNIP3Q9Y2W7 256 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 V9GYH0 126 aa8.24□□□□□ -1.09
PTPRN-213ENST00000476930 KIR2DL5BA0A0G2JN68 375 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 KIR2DL5BA0A0G2JPC4 375 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 A0A0J9YWU9 116 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 CCDC160A6NGH7 325 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 SULT1A3P0DMM9 295 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 SULT1A4P0DMN0 295 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 C2orf83Q53S99 150 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 PYDC2Q56P42 97 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 PRSS54Q6PEW0 395 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 Q6ZWC4 215 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 LYZL2Q7Z4W2 148 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 KIR2DL5AQ8N109 375 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 FAM24BQ8N5W8 94 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 STPG3Q8N7X2 389 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 SLC24A4Q8NFF2 622 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 KIR2DL5BQ8NHK3 375 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 TRIM63Q969Q1 353 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 SCGB3A2Q96PL1 93 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 MS4A6AQ9H2W1 248 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
PTPRN-213ENST00000476930 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
PTPRN-213ENST00000476930 UBE2CO00762 179 aa8.22□□□□□ -1.09
PTPRN-213ENST00000476930 NPPCP23582 126 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms