RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MUC15Q8N387 334 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 TMEM133Q9H2Q1 129 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 IL36BQ9NZH7 164 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 E7EUB6 86 aa13.27□□□□□ -0.28
TMEM53-208ENST00000476724 DIAPH2-AS1Q14236 149 aa13.27□□□□□ -0.28
TMEM53-208ENST00000476724 ZNF503Q96F45 646 aa13.27□□□□□ -0.28
TMEM53-208ENST00000476724 ZNF430Q9H8G1 570 aaPredicted RBP13.27□□□□□ -0.28
TMEM53-208ENST00000476724 DNAJC4Q9NNZ3 241 aa13.27□□□□□ -0.28
TMEM53-208ENST00000476724 CGB1A6NKQ9 187 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 AMBPP02760 352 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-208ENST00000476724 YPEL3P61236 119 aaPredicted RBP13.27□□□□□ -0.29
TMEM53-208ENST00000476724 WT1-ASQ06250 92 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 C11orf42Q8N5U0 333 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 OR1L4Q8NGR5 311 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 OR5R1Q8NH85 324 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 RALYQ9UKM9 306 aaKnown RBP13.27□□□□□ -0.29
TMEM53-208ENST00000476724 CFAP46Q8IYW2 2715 aa13.27□□□□□ -0.29
TMEM53-208ENST00000476724 PSMB11A5LHX3 300 aa13.26□□□□□ -0.29
TMEM53-208ENST00000476724 PPOXP50336 477 aa13.26□□□□□ -0.29
TMEM53-208ENST00000476724 PRRX1P54821 245 aa13.26□□□□□ -0.29
TMEM53-208ENST00000476724 SELENOTP62341 195 aa13.26□□□□□ -0.29
TMEM53-208ENST00000476724 JOSD1Q15040 202 aaPredicted RBP13.26□□□□□ -0.29
TMEM53-208ENST00000476724 OR2T6Q8NHC8 308 aa13.26□□□□□ -0.29
TMEM53-208ENST00000476724 HRNRQ86YZ3 2850 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-208ENST00000476724 K7EN84 100 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 CRYBB3P26998 211 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 GNG4P50150 75 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 TCRBV4S1A1TA0A5B7 111 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 C19orf84I3L1E1 186 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 OR10J4P0C629 311 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
TMEM53-208ENST00000476724 ZNF90Q03938 601 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 TMEM18Q96B42 140 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 PRDM13Q9H4Q3 707 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 LRBAP50851 2863 aa13.25□□□□□ -0.29
TMEM53-208ENST00000476724 SLC25A17O43808 307 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 HNF1AP20823 631 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 BPIFB3P59826 476 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 MMD2Q8IY49 270 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 LYNX1G3V0Z9 82 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 GCGP01275 180 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 RBP4P02753 201 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 LYNX1P0DP58 116 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 TIGITQ495A1 244 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 NPIPB3Q92617 1050 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 FAM167A-AS1Q96KT0 104 aa13.24□□□□□ -0.29
TMEM53-208ENST00000476724 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-208ENST00000476724 A0A1W2PPR1 153 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 ENSAO43768 121 aaKnown RBP13.23□□□□□ -0.29
TMEM53-208ENST00000476724 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 PRB1P04280 392 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 SUMO1P63165 101 aaKnown RBP13.23□□□□□ -0.29
TMEM53-208ENST00000476724 RPEL1Q2QD12 228 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 CENPWQ5EE01 88 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 C10orf113Q5VZT2 155 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 PVRIGQ6DKI7 326 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 CDPF1Q6NVV7 123 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 BBC3Q96PG8 261 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-208ENST00000476724 SLC25A2Q9BXI2 301 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 OSTCQ9NRP0 149 aa13.23□□□□□ -0.29
TMEM53-208ENST00000476724 IGHV2-26A0A0B4J1V2 119 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 A0A1W2PPI3 338 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 IGLV1-47P01700 117 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 C10orf55Q5SWW7 151 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 BEND2Q8NDZ0 799 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 COL8A2P25067 703 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 TAS2R60P59551 318 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 V9GYV3 84 aa13.22□□□□□ -0.29
TMEM53-208ENST00000476724 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 CORTO00230 105 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 CRYGCP07315 174 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 LGALS4P56470 323 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 PKIAP61925 76 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
TMEM53-208ENST00000476724 PRSS8Q16651 343 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 ZNF841Q6ZN19 808 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 OR5AU1Q8NGC0 362 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 CLEC7AQ9BXN2 247 aa13.21□□□□□ -0.29
TMEM53-208ENST00000476724 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 SLC17A3O00476 420 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 ISLRO14498 428 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 CRYGBP07316 175 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 RPL27AP46776 148 aaKnown RBP13.2□□□□□ -0.3
TMEM53-208ENST00000476724 PAX2Q02962 417 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 COX19Q49B96 90 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 GBGT1Q8N5D6 347 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 C22orf15Q8WYQ4 148 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 RITA1Q96K30 269 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 INSIG2Q9Y5U4 225 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms