RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CCR6P51684 374 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 PAFAH1B2P68402 229 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 HAGHQ16775 308 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 AARDQ4LEZ3 155 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 TMEM128Q5BJH2 165 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 ZNF600Q6ZNG1 722 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 SHPKQ9UHJ6 478 aa7.69□□□□□ -1.18
CCM2-208ENST00000476594 A0A1W2PS18 150 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 NAP1L6A6NFF2 107 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 CENPXA8MT69 81 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 F8W735 103 aaPredicted RBP7.68□□□□□ -1.18
CCM2-208ENST00000476594 RNASE2P10153 161 aaKnown RBP7.68□□□□□ -1.18
CCM2-208ENST00000476594 SLC25A4P12235 298 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 ADMP35318 185 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 KLF9Q13886 244 aaPredicted RBP7.68□□□□□ -1.18
CCM2-208ENST00000476594 TMEM187Q14656 261 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 SMCO1Q147U7 214 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 TMED4Q7Z7H5 227 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 CCDC190Q86UF4 302 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 DEFB125Q8N687 156 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 TMEM116Q8NCL8 245 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 MUC7Q8TAX7 377 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 RNASEH2CQ8TDP1 164 aaKnown RBP7.68□□□□□ -1.18
CCM2-208ENST00000476594 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 GPR146Q96CH1 333 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 OR10C1Q96KK4 312 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 CITED4Q96RK1 184 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 RBM38Q9H0Z9 239 aaKnown RBP7.68□□□□□ -1.18
CCM2-208ENST00000476594 V9GYH0 126 aa7.68□□□□□ -1.18
CCM2-208ENST00000476594 LOC102724200A0A096LPH7 203 aaPredicted RBP7.67□□□□□ -1.18
CCM2-208ENST00000476594 A0A0G2JRQ6 117 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 CLN5O75503 358 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 EDN2P20800 178 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 VAMP1P23763 118 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 NPY1RP25929 384 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 EIF2B2P49770 351 aaKnown RBP7.67□□□□□ -1.18
CCM2-208ENST00000476594 ATP5IP56385 69 aaPredicted RBP7.67□□□□□ -1.18
CCM2-208ENST00000476594 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
CCM2-208ENST00000476594 C2orf83Q53S99 150 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 PVRIGQ6DKI7 326 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 CENPSQ8N2Z9 138 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 OR4X1Q8NH49 305 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 OR1S1Q8NH92 325 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 IL17DQ8TAD2 202 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 LHFPL5Q8TAF8 219 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 TMEM230Q96A57 120 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 FAM110AQ9BQ89 295 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 RHPN1-AS1Q9BWJ2 59 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 GGTLC1Q9BX51 225 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 SMPXQ9UHP9 88 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 U3KQ87 197 aa7.67□□□□□ -1.18
CCM2-208ENST00000476594 A0A1B0GU03 582 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 ZNF207O43670 478 aaKnown RBP7.66□□□□□ -1.18
CCM2-208ENST00000476594 MED6O75586 246 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 TMEM50AO95807 157 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 IFNA10P01566 189 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 IGHV3-48P01763 117 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 APOC4P55056 127 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 UBE2MP61081 183 aaKnown RBP7.66□□□□□ -1.18
CCM2-208ENST00000476594 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
CCM2-208ENST00000476594 TNFRSF9Q07011 255 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 ZNF79Q15937 498 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 BSXQ3C1V8 233 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 OR1S2Q8NGQ3 325 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 GRAMD2BQ96HH9 432 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 METTL26Q96S19 204 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 PFDN2Q9UHV9 154 aa7.66□□□□□ -1.18
CCM2-208ENST00000476594 PUS1Q9Y606 427 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCM2-208ENST00000476594 IGHV3OR16-8A0A075B7F1 116 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 FAM90A26D6RGX4 464 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 DNASE2O00115 360 aaPredicted RBP7.65□□□□□ -1.18
CCM2-208ENST00000476594 CHEK1O14757 476 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 LYL1P12980 280 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 NPPCP23582 126 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 CNPY1Q3B7I2 92 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 NMSQ5H8A3 153 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 TOMM20LQ6UXN7 152 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 LINC00322Q6ZN03 302 aaPredicted RBP7.65□□□□□ -1.18
CCM2-208ENST00000476594 Q6ZRM9 215 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 Q8WTZ3 238 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 CIB3Q96Q77 187 aaPredicted RBP7.65□□□□□ -1.18
CCM2-208ENST00000476594 C7orf50Q9BRJ6 194 aaKnown RBP7.65□□□□□ -1.18
CCM2-208ENST00000476594 SRRQ9GZT4 340 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 HSPB7Q9UBY9 170 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 TMED3Q9Y3Q3 217 aa7.65□□□□□ -1.18
CCM2-208ENST00000476594 UBE2CO00762 179 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 LCE2BO14633 110 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 IFNA4P05014 189 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 FABP1P07148 127 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 SLC25A6P12236 298 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 NUP62P37198 522 aaPredicted RBP7.64□□□□□ -1.19
CCM2-208ENST00000476594 RND2P52198 227 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 RAB11AP62491 216 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 RPL11P62913 178 aaKnown RBP7.64□□□□□ -1.19
CCM2-208ENST00000476594 SUPT4H1P63272 117 aaKnown RBP7.64□□□□□ -1.19
CCM2-208ENST00000476594 LYZL2Q7Z4W2 148 aa7.64□□□□□ -1.19
CCM2-208ENST00000476594 LRTM2Q8N967 370 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms