RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 B2MP61769 119 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 RPP30P78346 268 aaKnown RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 HOXA4Q00056 320 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 ARL16Q0P5N6 197 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 KLRD1Q13241 179 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 HNF4GQ14541 408 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SRSF7Q16629 238 aaKnown RBP eCLIP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR2B11Q5JQS5 317 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF506Q5JVG8 444 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SPANXN5Q5MJ07 72 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 KPRPQ5T749 579 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 CCDC144NLQ6NUI1 221 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 DUX4L9Q6RFH8 374 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 HAPLN4Q86UW8 402 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 STX12Q86Y82 276 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 Q8N2B8 174 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 C11orf44Q8N8P7 122 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 CYB561D1Q8N8Q1 229 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR52L2PQ8NGH6 319 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR1L1Q8NH94 360 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TCTEX1D2Q8WW35 142 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 NPIPB3Q92617 1050 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 IL22RA2Q969J5 263 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TVP23CQ96ET8 276 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF714Q96N38 554 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SSX3Q99909 188 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 CABLES2Q9BTV7 478 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 GAL3ST2Q9H3Q3 398 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 RIMS4Q9H426 269 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 VSIRQ9H7M9 311 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TUBA4BQ9H853 241 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 NIT2Q9NQR4 276 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TNFRSF19Q9NS68 423 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 PPP1R14DQ9NXH3 145 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 KIAA1456Q9P272 454 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR14J1Q9UGF5 321 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TCF19Q9Y242 345 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR2W1Q9Y3N9 320 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 LINC00312Q9Y6C7 94 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 WSB1Q9Y6I7 421 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 URGCP-MRPS24S4R325 110 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SORL1Q92673 2214 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 CEBPZOSA8MTT3 80 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 C17orf98A8MV24 154 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OOSP1A8MZH6 123 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 M0QZK8 103 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 UBE2CO00762 179 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 SYNGR2O43760 224 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 YIF1AO95070 293 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OR2H2O95918 312 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 HSPB1P04792 205 aaKnown RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 S100A8P05109 93 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 FABP1P07148 127 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 IL6RP08887 468 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 PAX6P26367 422 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 CEACAM3P40198 252 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 CEACAM6P40199 344 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OR3A1P47881 315 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ERVK11-1P61568 191 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 RAB11AP62491 216 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 CTAG1AP78358 180 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 DLK1P80370 383 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 BAXQ07812 192 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF816Q0VGE8 651 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF146Q15072 292 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF726P1Q15940 193 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 LTC4SQ16873 150 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF585BQ52M93 769 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 SPINK9Q5DT21 86 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OR8G2PQ6IF36 304 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 HCP5Q6MZN7 132 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF880Q6PDB4 577 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 HEPN1Q6WQI6 88 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF66Q6ZN08 573 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 SSX7Q7RTT5 188 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 LINC00596Q86U02 117 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 NDUFA11Q86Y39 141 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 KLHDC1Q8N7A1 406 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNRF1Q8ND25 227 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OR11H6Q8NGC7 330 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF596Q8TC21 504 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 Q8WTZ3 238 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 MALSU1Q96EH3 234 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 YPEL4Q96NS1 127 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 OR4C12Q96R67 309 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 RAB40CQ96S21 281 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 CLEC7AQ9BXN2 247 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 PRSS22Q9GZN4 317 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 RBKSQ9H477 322 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 RPRMQ9NS64 109 aa3.36□□□□□ -1.87
VPS13D-206ENST00000476045 METTL1Q9UBP6 276 aaKnown RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 AMMECR1Q9Y4X0 333 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-206ENST00000476045 TRGV10A0A0A0MS01 117 aa3.35□□□□□ -1.87
VPS13D-206ENST00000476045 IGHV2-26A0A0B4J1V2 119 aa3.35□□□□□ -1.87
VPS13D-206ENST00000476045 IGHV3-43A0A0B4J1X8 118 aa3.35□□□□□ -1.87
VPS13D-206ENST00000476045 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
VPS13D-206ENST00000476045 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms