RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 VPS13CQ709C8 3753 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 RAB19A4D1S5 217 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 I3L2K1 104 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 IER3P46695 156 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 B2MP61769 119 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 C9orf152Q5JTZ5 239 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 EIF4E3Q8N5X7 224 aaKnown RBP10.82□□□□□ -0.68
TRAF4-210ENST00000475329 STPG3Q8N7X2 389 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 OR10G4Q8NGN3 311 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 SLC39A9Q9NUM3 307 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 SLC45A2Q9UMX9 530 aa10.82□□□□□ -0.68
TRAF4-210ENST00000475329 CTXND1A0A1B0GTU2 59 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 YIF1AO95070 293 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 IGHV3-48P01763 117 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
TRAF4-210ENST00000475329 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-210ENST00000475329 PRR20EP86478 221 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 PRR20CP86479 221 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 PRR20DP86480 221 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 PRR20BP86481 221 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 PRR20AP86496 221 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 FAM122CQ6P4D5 195 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 Q6YL49 198 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 TMEM116Q8NCL8 245 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 OR5T1Q8NG75 326 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-210ENST00000475329 THYN1Q9P016 225 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 MRPL36Q9P0J6 103 aaKnown RBP10.81□□□□□ -0.68
TRAF4-210ENST00000475329 ITPR2Q14571 2701 aa10.81□□□□□ -0.68
TRAF4-210ENST00000475329 IGHV3-21A0A0B4J1V1 117 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 TRAV1-1A0A0B4J248 108 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 A0A1B0GV50 99 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 TCRBV4S1A1TA0A5B7 111 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 ZFP92A6NM28 416 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 K7EIM0 57 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 SRP14P37108 136 aaKnown RBP10.8□□□□□ -0.68
TRAF4-210ENST00000475329 ZNF726P1Q15940 193 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 AKIRIN2Q53H80 203 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 UQCC3Q6UW78 93 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 SLC35E3Q7Z769 313 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 RPP25LQ8N5L8 163 aaKnown RBP10.8□□□□□ -0.68
TRAF4-210ENST00000475329 BPIFCQ8NFQ6 507 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 MBD3L1Q8WWY6 194 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-210ENST00000475329 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 TRGV9Q99603 122 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 SLC25A22Q9H936 323 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 VPREB3Q9UKI3 123 aa10.8□□□□□ -0.68
TRAF4-210ENST00000475329 NBPF19A0A087WUL8 3843 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 CCDC168Q8NDH2 2452 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 IGKV1D-37A0A075B6S9 117 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 TRAV41A0A0B4J266 112 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 SEC14L6B5MCN3 397 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 I3L521 148 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 IGHG2P01859 326 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 LINC00869P0C866 280 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 HNF1AP20823 631 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-210ENST00000475329 SELENOTP62341 195 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 LCN15Q6UWW0 184 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 IL17RELQ6ZVW7 336 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 SSX7Q7RTT5 188 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 YAE1D1Q9NRH1 226 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 TNFRSF19Q9NS68 423 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
TRAF4-210ENST00000475329 FLNAP21333 2647 aaKnown RBP10.78□□□□□ -0.68
TRAF4-210ENST00000475329 A0A1W2PPV4 95 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 G3V318 75 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 IGF1P05019 195 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 KLK9Q2XQG4 91 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 C19orf54Q5BKX5 351 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 GCSAMLQ5JQS6 135 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 PBDC1Q9BVG4 233 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 KLK9Q9UKQ9 250 aa10.78□□□□□ -0.68
TRAF4-210ENST00000475329 ANKRD34BA5PLL1 514 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-210ENST00000475329 CLN5O75503 358 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 OR2J3O76001 311 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 FABP1P07148 127 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 MFAP4P55083 255 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 RHOBP62745 196 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 RAB24Q969Q5 203 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms