RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SLC16A13Q7RTY0 426 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 CCDC140Q96MF4 163 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 HEYLQ9NQ87 328 aaPredicted RBP11.46□□□□□ -0.57
VARS-223ENST00000474643 KLK9Q9UKQ9 250 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
VARS-223ENST00000474643 C2orf70A6NJV1 201 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 IFNA21P01568 189 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 FOLR2P14207 255 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 MFAP2P55001 183 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 C21orf62Q9NYP8 219 aa11.45□□□□□ -0.58
VARS-223ENST00000474643 TECRQ9NZ01 308 aaKnown RBP11.45□□□□□ -0.58
VARS-223ENST00000474643 DNAH7Q8WXX0 4024 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 OR2T8A6NH00 312 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 SCARB1Q8WTV0 552 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 SEC22CQ9BRL7 303 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 HIPK2Q9H2X6 1198 aa11.44□□□□□ -0.58
VARS-223ENST00000474643 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 OR11H12B2RN74 326 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 FAM90A26D6RGX4 464 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 INS-IGF2F8WCM5 200 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 MT-CO2P00403 227 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 HOXB5P09067 269 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 DEFB114Q30KQ6 69 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 OR52B4Q8NGK2 314 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
VARS-223ENST00000474643 SRD5A3Q9H8P0 318 aa11.43□□□□□ -0.58
VARS-223ENST00000474643 GAR1Q9NY12 217 aaKnown RBP11.43□□□□□ -0.58
VARS-223ENST00000474643 K7EIM0 57 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 LGALS9O00182 355 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 CORTO00230 105 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 TGOLN2O43493 480 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 PITX3O75364 302 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 HTR2BP41595 481 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 MFAP4P55083 255 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 GGNBP1Q5YKI7 109 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
VARS-223ENST00000474643 GPHB5Q86YW7 130 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 DEFB125Q8N687 156 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 CACNG8Q8WXS5 425 aa11.42□□□□□ -0.58
VARS-223ENST00000474643 WDR89Q96FK6 387 aaPredicted RBP11.42□□□□□ -0.58
VARS-223ENST00000474643 NUPL2O15504 423 aaKnown RBP11.41□□□□□ -0.58
VARS-223ENST00000474643 GNG7O60262 68 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 CD7P09564 240 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
VARS-223ENST00000474643 CBLN1P23435 193 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 OPRK1P41145 380 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 CYCSP99999 105 aaKnown RBP11.41□□□□□ -0.58
VARS-223ENST00000474643 SPSB3Q6PJ21 355 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 Q6ZNX1 250 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 ALG5Q9Y673 324 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 SELENOKQ9Y6D0 94 aa11.41□□□□□ -0.58
VARS-223ENST00000474643 I3L2K1 104 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 SSNA1O43805 119 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 SCAF4O95104 1147 aaKnown RBP11.4□□□□□ -0.58
VARS-223ENST00000474643 IFNA10P01566 189 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 NPBWR1P48145 328 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 TNFRSF9Q07011 255 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 NOXA1Q86UR1 476 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 ATP6V0BQ99437 205 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 FAM110AQ9BQ89 295 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 RBKSQ9H477 322 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 RETNQ9HD89 108 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
VARS-223ENST00000474643 RYR3Q15413 4870 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 ADAP1O75689 374 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 EDN2P20800 178 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 ATP5IP56385 69 aaPredicted RBP11.39□□□□□ -0.59
VARS-223ENST00000474643 BTNL8Q6UX41 500 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 GSG1LQ6UXU4 331 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 ADAMTSL5Q6ZMM2 481 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 MARC2Q969Z3 335 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 C2orf50Q96LR7 162 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 TXN2Q99757 166 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 MED28Q9H204 178 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
VARS-223ENST00000474643 TMEM213A2RRL7 107 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 ZNF785A8K8V0 405 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 A8MWP6 167 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 MED6O75586 246 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 YIF1AO95070 293 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 NPY1RP25929 384 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 ID3Q02535 119 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms