RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 MRPS26Q9BYN8 205 aaKnown RBP5.18□□□□□ -1.58
VPS50-211ENST00000474412 KRTAP2-2Q9BYT5 123 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 EDA2RQ9HAV5 297 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 SCPEP1Q9HB40 452 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 NDUFA4L2Q9NRX3 87 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 SIGLEC8Q9NYZ4 499 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 PEMTQ9UBM1 199 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 PAM16Q9Y3D7 125 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 OR51B2Q9Y5P1 312 aa5.18□□□□□ -1.58
VPS50-211ENST00000474412 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 RBMY1BA6NDE4 496 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 RBMY1EA6NEQ0 496 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 A8MZ25 164 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 LGALS9O00182 355 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TGOLN2O43493 480 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 ZNF207O43670 478 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 IGKV1-5P01602 117 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 SERPINE2P07093 398 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 RBMY1DP0C7P1 496 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 P0C879 139 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TRAPPC2P0DI81 140 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TRAPPC2BP0DI82 140 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 DEFA4P12838 97 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 RORCP51449 518 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TSPAN5P62079 268 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 RNASE10Q5GAN6 216 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 GPR141Q7Z602 305 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 GTSCR1Q86UQ5 136 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 CLVS1Q8IUQ0 354 aaPredicted RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 UBAC2Q8NBM4 344 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 LHFPL5Q8TAF8 219 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 MUC7Q8TAX7 377 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TMEM190Q8WZ59 177 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 LSM10Q969L4 123 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 CMTM3Q96MX0 182 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 SRD5A3Q9H8P0 318 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 TMEM14BQ9NUH8 114 aa5.17□□□□□ -1.58
VPS50-211ENST00000474412 F11RQ9Y624 299 aaKnown RBP5.17□□□□□ -1.58
VPS50-211ENST00000474412 IGHV3-49A0A0A0MS15 119 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 SMIM31A0A1B0GVY4 71 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 IFITM10A6NMD0 228 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 H0Y980 276 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 RGS5O15539 181 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 CLEC3BP05452 202 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 PGAM2P15259 253 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 HIST1H1BP16401 226 aaKnown RBP5.16□□□□□ -1.58
VPS50-211ENST00000474412 ZNF182P17025 639 aaPredicted RBP5.16□□□□□ -1.58
VPS50-211ENST00000474412 CBLN1P23435 193 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 PIGPP57054 158 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 SP6Q3SY56 376 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 SLC25A24Q6NUK1 477 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 LINC00322Q6ZN03 302 aaPredicted RBP5.16□□□□□ -1.58
VPS50-211ENST00000474412 GPHB5Q86YW7 130 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 CMTM1Q8IZ96 169 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 SLC38A6Q8IZM9 456 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 UXS1Q8NBZ7 420 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 OR4C16Q8NGL9 310 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 OR1L8Q8NGR8 309 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 OR13C8Q8NGS7 320 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 MARCH1Q8TCQ1 289 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 DYNC2LI1Q8TCX1 351 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 CD300LFQ8TDQ1 290 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 BORCS5Q969J3 196 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 ZNF436Q9C0F3 470 aaPredicted RBP5.16□□□□□ -1.58
VPS50-211ENST00000474412 MRPL36Q9P0J6 103 aaKnown RBP5.16□□□□□ -1.58
VPS50-211ENST00000474412 MTFP1Q9UDX5 166 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 UBQLN2Q9UHD9 624 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 CEPT1Q9Y6K0 416 aa5.16□□□□□ -1.58
VPS50-211ENST00000474412 NBEAL2Q6ZNJ1 2754 aa5.15□□□□□ -1.58
VPS50-211ENST00000474412 TRBV7-1A0A0A6YYK4 115 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 H3BMQ9 156 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 SNAPC5O75971 98 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 DHFRP00374 187 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 CD74P04233 296 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 OR5AC1P0C628 307 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 PTBP1P26599 531 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS50-211ENST00000474412 AKR1C2P52895 323 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 RND3P61587 244 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 PRCDQ00LT1 54 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 TATDN3Q17R31 274 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 SCGB2B2Q4G0G5 96 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 ZNF57Q68EA5 555 aaPredicted RBP5.15□□□□□ -1.59
VPS50-211ENST00000474412 THOC7Q6I9Y2 204 aaKnown RBP5.15□□□□□ -1.59
VPS50-211ENST00000474412 SPSB3Q6PJ21 355 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 PLET1Q6UQ28 207 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 H2BFWTQ7Z2G1 175 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 OR2K2Q8NGT1 345 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 TMEM170AQ8WVE7 144 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 SMIM4Q8WVI0 70 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 AP3S1Q92572 193 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 PINX1Q96BK5 328 aaKnown RBP5.15□□□□□ -1.59
VPS50-211ENST00000474412 CXorf58Q96LI9 332 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 LYSTQ99698 3801 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 SRSF8Q9BRL6 282 aaKnown RBP5.15□□□□□ -1.59
VPS50-211ENST00000474412 C21orf62Q9NYP8 219 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 PRNDQ9UKY0 176 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 RYR2Q92736 4967 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms