RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 LHBP01229 141 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV1-46P01743 117 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 HBZP02008 142 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 IFNA6P05013 189 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ARG1P05089 322 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR9G9P0C7N8 305 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 IAPPP10997 89 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 FUT3P21217 361 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZP3P21754 424 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 COL8A2P25067 703 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PSMB6P28072 239 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 GLRXP35754 106 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PPP1CCP36873 323 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MDH2P40926 338 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 CA7P43166 264 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 GLP1RP43220 463 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 KIR2DS4P43632 304 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LPAR6P43657 344 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 UQCRFS1P47985 274 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 FABP6P51161 128 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DYNLT3P51808 116 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DLX1P56177 255 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 KLF3P57682 345 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2B8PP59922 312 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RUNX1Q01196 453 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 EWSR1Q01844 656 aaKnown RBP eCLIP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PAX5Q02548 391 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TGFBR3Q03167 851 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PRB3Q04118 309 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 BSPH1Q075Z2 132 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TFF3Q07654 80 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 AESQ08117 197 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM267Q0VDI3 215 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF816Q0VGE8 651 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2F1Q13607 317 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 EDDM3AQ14507 147 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 KIR2DS1Q14954 304 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ARL6IP1Q15041 203 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SURF2Q15527 256 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR8G1Q15617 311 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 NDUFA5Q16718 116 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LTC4SQ16873 150 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C17orf58Q2M2W7 97 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 IAH1Q2TAA2 248 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SMIM21Q3B7S5 101 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 Q3ZCU0 254 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RPL39P5Q59GN2 51 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM128Q5BJH2 165 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SPINK9Q5DT21 86 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2B11Q5JQS5 317 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TIMM23BQ5SRD1 257 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C1QTNF12Q5T7M4 302 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 WDR25Q64LD2 544 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RPL7L1Q6DKI1 246 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PRSS54Q6PEW0 395 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ATRAIDQ6UW56 229 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LYPD2Q6UXB3 125 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 BTNL3Q6UXE8 466 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 Q6ZRG5 221 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ACOT7LQ6ZUV0 252 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SSX7Q7RTT5 188 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF546Q86UE3 836 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SLC51BQ86UW2 128 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF573Q86YE8 665 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SGPP2Q8IWX5 399 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MKXQ8IYA7 352 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZCCHC24Q8N2G6 241 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 STPG2Q8N412 459 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DRAM1Q8N682 238 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF645Q8N7E2 425 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 FAM216BQ8N7L0 139 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF491Q8N8L2 437 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 CCDC71LQ8N9Z2 235 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF439Q8NDP4 499 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR8G5Q8NG78 346 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2Z1Q8NG97 314 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR4A4PQ8NGN8 299 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR1S2Q8NGQ3 325 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR10Z1Q8NGY1 313 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR4F5Q8NH21 305 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR51H1Q8NH63 302 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 COQ8AQ8NI60 647 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 STOML3Q8TAV4 291 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RNASE8Q8TDE3 154 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 NEK7Q8TDX7 302 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RTN4IP1Q8WWV3 396 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 IL1F10Q8WWZ1 152 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LEAP2Q969E1 77 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL53Q96EL3 112 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PIK3IP1Q96FE7 263 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 GALNT14Q96FL9 552 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ABHD14BQ96IU4 210 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C2orf50Q96LR7 162 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM56Q96MV1 263 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR4C12Q96R67 309 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 S100A13Q99584 98 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PHB2Q99623 299 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DHRS9Q9BPW9 319 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF251Q9BRH9 671 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms