RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 MED12LQ86YW9 2145 aa5.01□□□□□ -1.61
HERC4-209ENST00000473533 TEX50A0A1B0GTY4 177 aa5□□□□□ -1.61
HERC4-209ENST00000473533 TCRBV4S1A1TA0A5B7 111 aa5□□□□□ -1.61
HERC4-209ENST00000473533 K7EP13 123 aa5□□□□□ -1.61
HERC4-209ENST00000473533 LIPFP07098 398 aa5□□□□□ -1.61
HERC4-209ENST00000473533 RPL8P62917 257 aaKnown RBP5□□□□□ -1.61
HERC4-209ENST00000473533 SAPCD1Q5SSQ6 148 aa5□□□□□ -1.61
HERC4-209ENST00000473533 RNASEKQ6P5S7 137 aaKnown RBP5□□□□□ -1.61
HERC4-209ENST00000473533 SSX8Q7RTT4 187 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C1orf210Q8IVY1 113 aa5□□□□□ -1.61
HERC4-209ENST00000473533 NHLRC2Q8NBF2 726 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C1orf159Q96HA4 380 aa5□□□□□ -1.61
HERC4-209ENST00000473533 RPUSD1Q9UJJ7 312 aaKnown RBP5□□□□□ -1.61
HERC4-209ENST00000473533 TRAV30A0A087WSZ9 112 aa5□□□□□ -1.61
HERC4-209ENST00000473533 IGHV1-18A0A0C4DH31 117 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C3orf80F5H4A9 247 aa5□□□□□ -1.61
HERC4-209ENST00000473533 LHBP01229 141 aa5□□□□□ -1.61
HERC4-209ENST00000473533 IGLV2-8P01709 118 aa5□□□□□ -1.61
HERC4-209ENST00000473533 PCP4P48539 62 aa5□□□□□ -1.61
HERC4-209ENST00000473533 COTL1Q14019 142 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C17orf58Q2M2W7 97 aa5□□□□□ -1.61
HERC4-209ENST00000473533 VMA21Q3ZAQ7 101 aa5□□□□□ -1.61
HERC4-209ENST00000473533 THAP8Q8NA92 274 aa5□□□□□ -1.61
HERC4-209ENST00000473533 OR4C5Q8NGB2 326 aa5□□□□□ -1.61
HERC4-209ENST00000473533 GPR82Q96P67 336 aa5□□□□□ -1.61
HERC4-209ENST00000473533 DCTN5Q9BTE1 182 aa5□□□□□ -1.61
HERC4-209ENST00000473533 LINC00312Q9Y6C7 94 aa5□□□□□ -1.61
HERC4-209ENST00000473533 FREM1Q5H8C1 2179 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C22orf46C9J442 243 aa5□□□□□ -1.61
HERC4-209ENST00000473533 AGFG2O95081 481 aa5□□□□□ -1.61
HERC4-209ENST00000473533 KIAA1644Q3SXP7 199 aa5□□□□□ -1.61
HERC4-209ENST00000473533 TDRG1Q3Y452 100 aa5□□□□□ -1.61
HERC4-209ENST00000473533 TMEM177Q53S58 311 aa5□□□□□ -1.61
HERC4-209ENST00000473533 LRRC10Q5BKY1 277 aa5□□□□□ -1.61
HERC4-209ENST00000473533 PSMG4Q5JS54 123 aa5□□□□□ -1.61
HERC4-209ENST00000473533 TIMM23BQ5SRD1 257 aa5□□□□□ -1.61
HERC4-209ENST00000473533 MOGAT3Q86VF5 341 aa5□□□□□ -1.61
HERC4-209ENST00000473533 MUC15Q8N387 334 aa5□□□□□ -1.61
HERC4-209ENST00000473533 C8orf31Q8N9H6 132 aa5□□□□□ -1.61
HERC4-209ENST00000473533 ALKBH7Q9BT30 221 aaPredicted RBP5□□□□□ -1.61
HERC4-209ENST00000473533 MAP1LC3CQ9BXW4 147 aa5□□□□□ -1.61
HERC4-209ENST00000473533 RPP21Q9H633 154 aaKnown RBP5□□□□□ -1.61
HERC4-209ENST00000473533 DOCK11Q5JSL3 2073 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 H0YJW9 148 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SPINK4O60575 86 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 HLA-DRB1P01911 266 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CT45A6P0DMU7 189 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CT45A5P0DMU8 189 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CT45A7P0DMV0 189 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 MC5RP33032 325 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 KIR2DL2P43627 348 aaPredicted RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF329Q86UD4 541 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SPACA3Q8IXA5 215 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 C5orf17Q8NAS9 161 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 NUP35Q8NFH5 326 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 NUDT10Q8NFP7 164 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 OR4C13Q8NGP0 309 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 TMEM167AQ8TBQ9 72 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 FLYWCH2Q96CP2 140 aaKnown RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 NUDT11Q96G61 164 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 HARBI1Q96MB7 349 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SLC25A2Q9BXI2 301 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CLEC7AQ9BXN2 247 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 GSX1Q9H4S2 264 aaPredicted RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 NDUFA4L2Q9NRX3 87 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 DKK4Q9UBT3 224 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 R4GN57 208 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 DOCK10Q96BY6 2186 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 PCSK5Q92824 1860 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF407Q9C0G0 2248 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 HEATR1Q9H583 2144 aaKnown RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 F2Z2F3 143 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CHEK1O14757 476 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CRXO43186 299 aaPredicted RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 P01737 135 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SLC25A5P05141 298 aaKnown RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 TNFRSF1AP19438 455 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 CD33P20138 364 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF134P52741 427 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SLC25A34Q6PIV7 304 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF833PQ6ZTB9 187 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SMIM15Q7Z3B0 74 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 TMEM186Q96B77 213 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SNRNP40Q96DI7 357 aaKnown RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 RCHY1Q96PM5 261 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 PRO3102Q9H379 93 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 TNFRSF19Q9NS68 423 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 ZNF355PQ9NSJ1 428 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 EPDR1Q9UM22 224 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 KLF12Q9Y4X4 402 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SPTA1P02549 2419 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 IGLC7A0M8Q6 106 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 VSTM5A8MXK1 200 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 SAA1P0DJI8 122 aaPredicted RBP4.99□□□□□ -1.61
HERC4-209ENST00000473533 LINC00205P59089 165 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 TNXAQ16473 311 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 Q56UQ5 140 aa4.99□□□□□ -1.61
HERC4-209ENST00000473533 Q6AWC8 147 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms