RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RELNP78509 3460 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 IGLV3-9A0A075B6K5 115 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 A0A1W2PRE2 83 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 SMIM27A0A1W2PRY6 76 aa17.15■□□□□ 0.34
COL18A1-207ENST00000473212 SAA1P0DJI8 122 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-207ENST00000473212 SSBP2P81877 361 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-207ENST00000473212 FAM168AQ92567 244 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 RNF2Q99496 336 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 ZNF292O60281 2723 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 DLEU1O43261 78 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 FCN3O75636 299 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 OR4B1Q8NGF8 309 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 OR2T6Q8NHC8 308 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 C19orf24Q9BVV8 132 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 SSBP3Q9BWW4 388 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-207ENST00000473212 LPAR2Q9HBW0 351 aa17.14■□□□□ 0.33
COL18A1-207ENST00000473212 CCL3L1P16619 93 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 CD69Q07108 199 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 DIAPH2-AS1Q14236 149 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 COX19Q49B96 90 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 SLC25A48Q6ZT89 311 aaKnown RBP17.13■□□□□ 0.33
COL18A1-207ENST00000473212 PNKDQ8N490 385 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 SLC25A2Q9BXI2 301 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 HLA-DQA1P01909 254 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 UBE2L3P68036 154 aaKnown RBP17.13■□□□□ 0.33
COL18A1-207ENST00000473212 FAM19A2Q8N3H0 131 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 OR1L8Q8NGR8 309 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 FAM167A-AS1Q96KT0 104 aa17.13■□□□□ 0.33
COL18A1-207ENST00000473212 ZNF324O75467 553 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-207ENST00000473212 NPSP0C0P6 89 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 SPATA45Q537H7 98 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 RPUSD1Q9UJJ7 312 aaKnown RBP17.12■□□□□ 0.33
COL18A1-207ENST00000473212 APCSP02743 223 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 C10orf55Q5SWW7 151 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 OR5B3Q8NH48 314 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 MRPL20Q9BYC9 149 aaKnown RBP17.12■□□□□ 0.33
COL18A1-207ENST00000473212 GOLT1BQ9Y3E0 138 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 ZZEF1O43149 2961 aa17.12■□□□□ 0.33
COL18A1-207ENST00000473212 IZUMO1RA6ND01 250 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 USF1P22415 310 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-207ENST00000473212 CHRNB4P30926 498 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 GATA4P43694 442 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 ZNF788Q6ZQV5 615 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 BET1LQ9NYM9 111 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 ZFHX2Q9C0A1 2572 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-207ENST00000473212 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 TPRP12270 2363 aaKnown RBP17.11■□□□□ 0.33
COL18A1-207ENST00000473212 PYYP10082 97 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 CTRLP40313 264 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 SLAQ13239 276 aa17.11■□□□□ 0.33
COL18A1-207ENST00000473212 PSMB11A5LHX3 300 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 LHFPL4Q7Z7J7 247 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 NIT1Q86X76 327 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 TSKUQ8WUA8 353 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 ZNF331Q9NQX6 463 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-207ENST00000473212 C3orf79P0CE67 100 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 NTF3P20783 257 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 TFPI2P48307 235 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 ZADH2Q8N4Q0 377 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 MRPL32Q9BYC8 188 aaKnown RBP17.1■□□□□ 0.33
COL18A1-207ENST00000473212 DNAJC4Q9NNZ3 241 aa17.1■□□□□ 0.33
COL18A1-207ENST00000473212 ATP5IP56385 69 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-207ENST00000473212 HARBI1Q96MB7 349 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 COMMD5Q9GZQ3 224 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 TRAV34A0A0B4J273 112 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 PRR31Q5SQ13 230 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 WNT10AQ9GZT5 417 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 LINC00574Q9H8X3 128 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 ZNF355PQ9NSJ1 428 aa17.09■□□□□ 0.33
COL18A1-207ENST00000473212 AMMECR1Q9Y4X0 333 aaPredicted RBP17.09■□□□□ 0.33
COL18A1-207ENST00000473212 NDUFA4L2Q9NRX3 87 aa17.08■□□□□ 0.33
COL18A1-207ENST00000473212 DLL1O00548 723 aa17.08■□□□□ 0.32
COL18A1-207ENST00000473212 CD40P25942 277 aa17.08■□□□□ 0.32
COL18A1-207ENST00000473212 MMDQ15546 238 aa17.08■□□□□ 0.32
COL18A1-207ENST00000473212 APC2O95996 2303 aa17.08■□□□□ 0.32
COL18A1-207ENST00000473212 TM4SF5O14894 197 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 PRRX1P54821 245 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 ERHP84090 104 aaKnown RBP17.07■□□□□ 0.32
COL18A1-207ENST00000473212 GAGE1Q13065 139 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 C18orf32Q8TCD1 76 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 DPRXA6NFQ7 191 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 COX7A2P2O60397 106 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 RPL8P62917 257 aaKnown RBP17.07■□□□□ 0.32
COL18A1-207ENST00000473212 RUSC1-AS1Q66K80 236 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 CACNG8Q8WXS5 425 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 PPIAL4AQ9Y536 164 aa17.07■□□□□ 0.32
COL18A1-207ENST00000473212 MFAP2P55001 183 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 PRB3Q04118 309 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-207ENST00000473212 ZNF833PQ6ZTB9 187 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 ZNF714Q96N38 554 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 PAXXQ9BUH6 204 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 MRPL36Q9P0J6 103 aaKnown RBP17.06■□□□□ 0.32
COL18A1-207ENST00000473212 CEACAM4O75871 244 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 SELENOVP59797 346 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 C1orf185Q5T7R7 199 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 GDF5OSQ5U4N7 250 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 PRR27Q6MZM9 219 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 ATOH7Q8N100 152 aa17.06■□□□□ 0.32
COL18A1-207ENST00000473212 OSR1Q8TAX0 266 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-207ENST00000473212 hADV38S2A0JD32 116 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms