RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 TFPI2P48307 235 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 MRPS10P82664 201 aaKnown RBP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 ZNF124Q15973 351 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 AARDQ4LEZ3 155 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 Q6ZRM9 215 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 TCF24Q7RTU0 167 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 ST8SIA2Q92186 375 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
VTI1A-203ENST00000472892 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.61
VTI1A-203ENST00000472892 IGKV3-7A0A075B6H7 116 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 A0A1B0GU03 582 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 RGS5O15539 181 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
VTI1A-203ENST00000472892 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 MEF2DQ14814 521 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 SPCS2Q15005 226 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 SURF2Q15527 256 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-203ENST00000472892 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 OR52E5Q8NH55 327 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 GLYATL2Q8WU03 294 aa11.26□□□□□ -0.61
VTI1A-203ENST00000472892 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-203ENST00000472892 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 CLN5O75503 358 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 DFFBO76075 338 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-203ENST00000472892 SPCS3P61009 180 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 MLANAQ16655 118 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 FAM219AQ8IW50 185 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 LINC00528Q8N1L1 170 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 SMIM4Q8WVI0 70 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 MS4A6AQ9H2W1 248 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-203ENST00000472892 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
VTI1A-203ENST00000472892 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-203ENST00000472892 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
VTI1A-203ENST00000472892 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 CTDSPLO15194 276 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 OR5AC1P0C628 307 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 DHODHQ02127 395 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
VTI1A-203ENST00000472892 TMEM217Q8N7C4 229 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 LHFPL5Q8TAF8 219 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 NAA60Q9H7X0 242 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
VTI1A-203ENST00000472892 C14orf166Q9Y224 244 aaKnown RBP11.24□□□□□ -0.61
VTI1A-203ENST00000472892 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 NPPCP23582 126 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 OPRK1P41145 380 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 SELENOHQ8IZQ5 122 aaKnown RBP11.23□□□□□ -0.61
VTI1A-203ENST00000472892 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
VTI1A-203ENST00000472892 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 RBPMSQ93062 196 aaKnown RBP11.23□□□□□ -0.61
VTI1A-203ENST00000472892 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-203ENST00000472892 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
VTI1A-203ENST00000472892 TRAV30A0A087WSZ9 112 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 A0A1W2PS18 150 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 CRYM-AS1A6NIL9 109 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-203ENST00000472892 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 AKAIN1P0CW23 69 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 CRYBB3P26998 211 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 HTR2BP41595 481 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 OR4C16Q8NGL9 310 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 DYNC2LI1Q8TCX1 351 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
VTI1A-203ENST00000472892 DEFB131AP59861 70 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 RPL11P62913 178 aaKnown RBP11.21□□□□□ -0.61
VTI1A-203ENST00000472892 IL18Q14116 193 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 C2orf83Q53S99 150 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
VTI1A-203ENST00000472892 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 RAB2BQ8WUD1 216 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 TMEM230Q96A57 120 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 METTL26Q96S19 204 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 PRRT1Q99946 306 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 RARRES2Q99969 163 aa11.21□□□□□ -0.61
VTI1A-203ENST00000472892 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.61
VTI1A-203ENST00000472892 CCDC59Q9P031 241 aaKnown RBP11.21□□□□□ -0.61
VTI1A-203ENST00000472892 RPS10-NUDT3A0A1W2PQS6 291 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms