RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MIXL1Q9H2W2 232 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 MAP1LC3AQ9H492 121 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 FAM96AQ9H5X1 160 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 DCCP43146 1447 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 MUC4Q99102 2169 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 KIAA1549Q9HCM3 1950 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 PROSCO94903 275 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 TPM1P09493 284 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 SPINT3P49223 89 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 ANGPT1Q15389 498 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 BATFQ16520 125 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 MRPL30Q8TCC3 161 aaKnown RBP-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 SPANXB1Q9NS25 103 aaPredicted RBP-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 EPDR1Q9UM22 224 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 HS3ST2Q9Y278 367 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 HECW1Q76N89 1606 aa-0.58□□□□□ -2.5
PRPF40A-207ENST00000471701 TAF1LQ8IZX4 1826 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 FAAHO00519 579 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 CCL16O15467 120 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 RPL12P30050 165 aaKnown RBP-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 HOXA6P31267 233 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 MARCKSL1P49006 195 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 Q6ZS92 163 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 Q8N402 240 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 C4orf3Q8WVX3 66 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 ITFG2Q969R8 447 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 C19orf60Q96EN9 201 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 TSPAN32Q96QS1 320 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 DCUN1D5Q9BTE7 237 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 DCSTAMPQ9H295 470 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 OR51V1Q9H2C8 321 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 TPRP12270 2363 aaKnown RBP-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 PIEZO1Q92508 2521 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 SBF1O95248 1867 aa-0.59□□□□□ -2.5
PRPF40A-207ENST00000471701 RAD50Q92878 1312 aa-0.6□□□□□ -2.5
PRPF40A-207ENST00000471701 IQCF5A8MTL0 148 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 BUB1B-PAK6H3BSN5 160 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 OR2B3O76000 313 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 HADHBP55084 474 aaKnown RBP-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 HBA1P69905 142 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 OR13C4Q8NGS5 318 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 GPR146Q96CH1 333 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 TAS2R7Q9NYW3 318 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 ECM29Q5VYK3 1845 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 IGF2RP11717 2491 aa-0.6□□□□□ -2.51
PRPF40A-207ENST00000471701 ZDBF2Q9HCK1 2354 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 NUPR2A6NF83 97 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 FABP12A6NFH5 140 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 SMIM9A6NGZ8 99 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 YKT6O15498 198 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 FOXA3P55318 350 aaPredicted RBP-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 HIST3H2BBQ8N257 126 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 OR52R1Q8NGF1 315 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 ZNF75CPQ92670 426 aaPredicted RBP-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 CMTM5Q96DZ9 223 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 CMTM6Q9NX76 183 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 ERGIC3Q9Y282 383 aa-0.61□□□□□ -2.51
PRPF40A-207ENST00000471701 IGHV1-58A0A0C4DH39 117 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 CDC42P60953 191 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 LINC00301Q8NCQ3 95 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 OR13D1Q8NGV5 346 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 H1FXQ92522 213 aaKnown RBP-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 SLC39A9Q9NUM3 307 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 PLEKHJ1Q9NW61 149 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 JPT1Q9UK76 154 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 SLC35A3Q9Y2D2 325 aa-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 V9GYY5 206 aaPredicted RBP-0.62□□□□□ -2.51
PRPF40A-207ENST00000471701 SCN10AQ9Y5Y9 1956 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 TRAV9-1A0A075B6T8 112 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 PFDN6O15212 129 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 NUPR1O60356 82 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 NAA20P61599 178 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 ALKAL1Q6UXT8 129 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 LRRC25Q8N386 305 aaPredicted RBP-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 C7orf50Q9BRJ6 194 aaKnown RBP-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 C11orf68Q9H3H3 251 aaKnown RBP-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 PSTPIP2Q9H939 334 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 FBXL12Q9NXK8 326 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 TNFSF18Q9UNG2 199 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 PIK3R4Q99570 1358 aa-0.63□□□□□ -2.51
PRPF40A-207ENST00000471701 MYO3BQ8WXR4 1341 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 UCHL3P15374 230 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 PSMB6P28072 239 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 BLVRAP53004 296 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 BRMS1LQ5PSV4 323 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 SFXN4Q6P4A7 337 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 SYCE1Q8N0S2 351 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 OR51D1Q8NGF3 324 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 XPNPEP1Q9NQW7 623 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 C14orf105Q9NVL8 296 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 C3orf18Q9UK00 162 aa-0.64□□□□□ -2.51
PRPF40A-207ENST00000471701 PLXNA4Q9HCM2 1894 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 DPRXA6NFQ7 191 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 C5orf67F2Z3F1 127 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 SSNA1O43805 119 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 ZNF682O95780 498 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 UBE2G2P60604 165 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 MLLT11Q13015 90 aaPredicted RBP-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 ESRGQ1W209 222 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms