RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 MLANAQ16655 118 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 UXS1Q8NBZ7 420 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 OR4D5Q8NGN0 318 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 RNASEH2CQ8TDP1 164 aaKnown RBP13.48□□□□□ -0.25
VPS72-204ENST00000471423 OR10C1Q96KK4 312 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
VPS72-204ENST00000471423 SIGLEC8Q9NYZ4 499 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 U3KQ87 197 aa13.48□□□□□ -0.25
VPS72-204ENST00000471423 WI2-2373I1.2A0A1W2PRP0 233 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 A8MWP6 167 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
VPS72-204ENST00000471423 SYNGR2O43760 224 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 IL5P05113 134 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 NPBWR1P48145 328 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 IAH1Q2TAA2 248 aaPredicted RBP13.47□□□□□ -0.25
VPS72-204ENST00000471423 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 NOXA1Q86UR1 476 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
VPS72-204ENST00000471423 PRR25Q96S07 402 aa13.47□□□□□ -0.25
VPS72-204ENST00000471423 MRPL36Q9P0J6 103 aaKnown RBP13.47□□□□□ -0.25
VPS72-204ENST00000471423 RPS10-NUDT3A0A1W2PQS6 291 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 TMEM213A2RRL7 107 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 WRBO00258 174 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 NDUFA4O00483 81 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 LY86O95711 162 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 SPNP16150 400 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 NKX2-1P43699 371 aaPredicted RBP13.46□□□□□ -0.25
VPS72-204ENST00000471423 MRAPQ8TCY5 172 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 CACNG8Q8WXS5 425 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
VPS72-204ENST00000471423 CIB3Q96Q77 187 aaPredicted RBP13.46□□□□□ -0.25
VPS72-204ENST00000471423 ZNF256Q9Y2P7 627 aaPredicted RBP13.46□□□□□ -0.25
VPS72-204ENST00000471423 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 INMT-MINDY4F8WBC2 141 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 K7EIL1 84 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 SCGB1D2O95969 90 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 FOLR2P14207 255 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 POLR2GP62487 172 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS72-204ENST00000471423 ID3Q02535 119 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 RELQ04864 619 aaPredicted RBP13.45□□□□□ -0.26
VPS72-204ENST00000471423 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
VPS72-204ENST00000471423 OR4X1Q8NH49 305 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 PALMDQ9NP74 551 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 GSKIPQ9P0R6 139 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
VPS72-204ENST00000471423 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 FAM25EA8MYX2 175 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 CLN5O75503 358 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 IFNA4P05014 189 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 DYNLRB2Q8TF09 96 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
VPS72-204ENST00000471423 GPN1Q9HCN4 374 aaPredicted RBP13.44□□□□□ -0.26
VPS72-204ENST00000471423 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
VPS72-204ENST00000471423 H3BP45 60 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 SSSCA1O60232 199 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 PRAF2O60831 178 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 TMEM50AO95807 157 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 SLC25A4P12235 298 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 CBLN1P23435 193 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 RND2P52198 227 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 ATP5IP56385 69 aaPredicted RBP13.43□□□□□ -0.26
VPS72-204ENST00000471423 ETFRF1Q6IPR1 90 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 PRSS54Q6PEW0 395 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 MARVELD1Q9BSK0 173 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 DAZ1Q9NQZ3 744 aaKnown RBP13.43□□□□□ -0.26
VPS72-204ENST00000471423 SELENOKQ9Y6D0 94 aa13.43□□□□□ -0.26
VPS72-204ENST00000471423 C5orf51A6NDU8 294 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 YIF1AO95070 293 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 GP9P14770 177 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 ELLP55199 621 aaPredicted RBP13.42□□□□□ -0.26
VPS72-204ENST00000471423 RAB11AP62491 216 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 CD69Q07108 199 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
VPS72-204ENST00000471423 SPANXN5Q5MJ07 72 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 ACY3Q96HD9 319 aa13.42□□□□□ -0.26
VPS72-204ENST00000471423 IZUMO1RA6ND01 250 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 ZNF207O43670 478 aaKnown RBP13.41□□□□□ -0.26
VPS72-204ENST00000471423 SCGB2A1O75556 95 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 RPP30P78346 268 aaKnown RBP13.41□□□□□ -0.26
VPS72-204ENST00000471423 LCN12Q6JVE5 192 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 BTNL8Q6UX41 500 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 TMEM116Q8NCL8 245 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 MLXQ9UH92 298 aa13.41□□□□□ -0.26
VPS72-204ENST00000471423 RCL1Q9Y2P8 373 aaKnown RBP13.41□□□□□ -0.26
VPS72-204ENST00000471423 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 MBPP02686 304 aaPredicted RBP13.4□□□□□ -0.26
VPS72-204ENST00000471423 IGLC1P0CG04 106 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 C8orf88P0DMB2 117 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 DEFB114Q30KQ6 69 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 TIGITQ495A1 244 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 OR2K2Q8NGT1 345 aa13.4□□□□□ -0.26
VPS72-204ENST00000471423 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms