RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PMS2P11Q13670 270 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 C10orf91Q5T1B1 145 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 PVRIGQ6DKI7 326 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 DYNAPQ8N1N2 210 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 Q8N6K4 173 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 SCRT1Q9BWW7 348 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 CENPVL3A0A0U1RRI6 287 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 A0A1B0GV50 99 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 MAP1LC3B2A6NCE7 125 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 GAMTQ14353 236 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 ZNF726P1Q15940 193 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 LCN15Q6UWW0 184 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 TEX29Q8N6K0 151 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 OR1P1Q8NH06 330 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 SRSF12Q8WXF0 261 aaKnown RBP13.89□□□□□ -0.19
HSPG2-208ENST00000471322 MAP1LC3BQ9GZQ8 125 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 CARHSP1Q9Y2V2 147 aaKnown RBP13.89□□□□□ -0.19
HSPG2-208ENST00000471322 PXMP4Q9Y6I8 212 aa13.89□□□□□ -0.19
HSPG2-208ENST00000471322 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
HSPG2-208ENST00000471322 FCN1O00602 326 aa13.88□□□□□ -0.19
HSPG2-208ENST00000471322 SFTA3P0C7M3 94 aa13.88□□□□□ -0.19
HSPG2-208ENST00000471322 AJUBAQ96IF1 538 aa13.88□□□□□ -0.19
HSPG2-208ENST00000471322 IGHV1-69DA0A0B4J2H0 117 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 TEX22C9J3V5 150 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 IFNA1P01562 189 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 IGHV1-69P01742 117 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 TMEM11P17152 192 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 SVBPQ8N300 66 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 C17orf50Q8WW18 174 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 SLC35B3Q9H1N7 401 aa13.87□□□□□ -0.19
HSPG2-208ENST00000471322 TAGLN2P37802 199 aaKnown RBP13.86□□□□□ -0.19
HSPG2-208ENST00000471322 B2MP61769 119 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 DEFA5Q01523 94 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 KHDC3LQ587J8 217 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 ZNF506Q5JVG8 444 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 FAM122CQ6P4D5 195 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 RBMS3Q6XE24 437 aaKnown RBP13.86□□□□□ -0.19
HSPG2-208ENST00000471322 OR1L6Q8NGR2 347 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 SLC45A2Q9UMX9 530 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 A0A1W2PPV4 95 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 NCBP2LA6PVI3 153 aaKnown RBP13.86□□□□□ -0.19
HSPG2-208ENST00000471322 CD24P25063 80 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 CDC34P49427 236 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-208ENST00000471322 FXYD3Q14802 87 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 MIC13Q5XKP0 118 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 DUX5Q96PT3 197 aa13.86□□□□□ -0.19
HSPG2-208ENST00000471322 F11RQ9Y624 299 aaKnown RBP13.86□□□□□ -0.19
HSPG2-208ENST00000471322 C9JQL5 133 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 YIF1AO95070 293 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
HSPG2-208ENST00000471322 REG1AP05451 166 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 AREGP15514 252 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PPT1P50897 306 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 SSBP2P81877 361 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PRR20EP86478 221 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PRR20CP86479 221 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PRR20DP86480 221 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PRR20BP86481 221 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PRR20AP86496 221 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 STPG3Q8N7X2 389 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 SIGLECL1Q8N7X8 197 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 SSMEM1Q8WWF3 244 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-208ENST00000471322 C19orf24Q9BVV8 132 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 SLC25A22Q9H936 323 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 DNHD1Q96M86 4753 aa13.85□□□□□ -0.19
HSPG2-208ENST00000471322 TCF21O43680 179 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 ADCYAP1P18509 176 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 PAX6P26367 422 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 HAGHQ16775 308 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 SSX7Q7RTT5 188 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 ABHD5Q8WTS1 349 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 RARRES2Q99969 163 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 GNG13Q9P2W3 67 aa13.84□□□□□ -0.19
HSPG2-208ENST00000471322 CRYGCP07315 174 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 BCL2P10415 239 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-208ENST00000471322 MLANAQ16655 118 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 OR2T6Q8NHC8 308 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-208ENST00000471322 MISP3Q96FF7 219 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 FNDC4Q9H6D8 234 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-208ENST00000471322 ESM1Q9NQ30 184 aa13.83□□□□□ -0.2
HSPG2-208ENST00000471322 LOC102723971A0A1B0GUV8 181 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 SNAPINO95295 136 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 OR10J1P30954 320 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 SELENOTP62341 195 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 RHOBP62745 196 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 ICAM4Q14773 271 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 DEFB112Q30KQ8 113 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 SLC35E3Q7Z769 313 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 THAP8Q8NA92 274 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms