RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SMIM2Q9BVW6 85 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 CDK5RAP2Q96SN8 1893 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 C17orf98A8MV24 154 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 F8VVB4 439 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 F8VWA3 439 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 DEFB130BP0DP73 79 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 DEFB130AP0DP74 79 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 PYYP10082 97 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 FAM90A2PQ658T7 463 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 OSR1Q8TAX0 266 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-210ENST00000471181 NBR2O15453 112 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 CRLF1O75462 422 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 FCN3O75636 299 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 CISD3P0C7P0 127 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 TCF15Q12870 199 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 KIAA0040Q15053 153 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 CDCP2Q5VXM1 449 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-210ENST00000471181 TIMM21Q9BVV7 248 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 BSPH1Q075Z2 132 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 ACP7Q6ZNF0 438 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 C1QL4Q86Z23 238 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 CHCHD1Q96BP2 118 aaKnown RBP5.77□□□□□ -1.49
BRCA1-210ENST00000471181 OVOL1O14753 267 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 NBL1P41271 181 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 RPL23P62829 140 aaKnown RBP5.77□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 SAXO1Q8IYX7 474 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 DEFB105AQ8NG35 78 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 RNF125Q96EQ8 232 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
BRCA1-210ENST00000471181 C1QTNF9P0C862 333 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 SELLP14151 372 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 CFHR3Q02985 330 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 BHLHA9Q7RTU4 235 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 SPRED2Q7Z698 418 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 MLNRO43193 412 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-210ENST00000471181 PFN2P35080 140 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 MESP2Q0VG99 397 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 SLC25A47Q6Q0C1 308 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 ADAMTSL5Q6ZMM2 481 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 CFHR5Q9BXR6 569 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 CENPVL1A0A0U1RR11 272 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 PQLC2LA1A4F0 135 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 GAS1P54826 345 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 ATP5IP56385 69 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-210ENST00000471181 PAX8Q06710 450 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 FAM27E3Q08E93 113 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 DSCR8Q96T75 97 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 AMELYQ99218 206 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 ARFGEF1Q9Y6D6 1849 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 GUSBP1Q15486 140 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 Q96M66 194 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 MPTX1A8MV57 137 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 D6R8Y8 96 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 RAMP1O60894 148 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 TBX6O95947 436 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-210ENST00000471181 KLF5Q13887 457 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-210ENST00000471181 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 SCRT2Q9NQ03 307 aa5.76□□□□□ -1.49
BRCA1-210ENST00000471181 A0A1W2PRE2 83 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 RSPO4Q2I0M5 234 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-210ENST00000471181 PVRIGQ6DKI7 326 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 ASPHD2Q6ICH7 369 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 A0A087X0K7 114 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 PPBPP02775 128 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 SRP19P09132 144 aaKnown RBP5.75□□□□□ -1.49
BRCA1-210ENST00000471181 COX14Q96I36 57 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 SMPXQ9UHP9 88 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 hDV102S1A0JD36 115 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 IQCF6A8MYZ5 107 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 F2Z2F3 143 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 RS1O15537 224 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 NXPH4O95158 308 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 HLA-DQB1P01920 261 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 CMC4P56277 68 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-210ENST00000471181 RPL15P61313 204 aaKnown RBP5.75□□□□□ -1.49
BRCA1-210ENST00000471181 IGLV3-16A0A075B6K0 115 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 C12orf77C9JDV5 145 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 TM4SF5O14894 197 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 PEBP1P30086 187 aaKnown RBP5.75□□□□□ -1.49
BRCA1-210ENST00000471181 UBE2BP63146 152 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 TMEM170AQ8WVE7 144 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 LHFPL6Q9Y693 200 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 TRAV40A0A0B4J280 105 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 F5H768 121 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 IGHG4P01861 327 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 NABP1Q96AH0 204 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 SIGLEC12Q96PQ1 595 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 SSC5DA1L4H1 1573 aa5.75□□□□□ -1.49
BRCA1-210ENST00000471181 A0A087WWL8 130 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 TRBV5-5A0A0J9YX44 114 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 LOC101059948A0A1B0GTJ6 334 aa5.74□□□□□ -1.49
BRCA1-210ENST00000471181 PSG1P11464 419 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms