RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 A0A1W2PN81 502 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
CBWD3-205ENST00000469687 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
CBWD3-205ENST00000469687 RBPJQ06330 500 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 CACNG8Q8WXS5 425 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 TMEM133Q9H2Q1 129 aa11.82□□□□□ -0.52
CBWD3-205ENST00000469687 HELTA6NFD8 242 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 GPX4P36969 197 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-205ENST00000469687 PPOXP50336 477 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 SUMO1P63165 101 aaKnown RBP11.81□□□□□ -0.52
CBWD3-205ENST00000469687 FAM209BQ5JX69 171 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 HCP5Q6MZN7 132 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 OR4A5Q8NH83 315 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 B9A039 149 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 PYYP10082 97 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 CBLN1P23435 193 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 GNG4P50150 75 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 CDSNQ15517 529 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 ASPHD1Q5U4P2 390 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 PNKDQ8N490 385 aa11.81□□□□□ -0.52
CBWD3-205ENST00000469687 IGHV2-26A0A0B4J1V2 119 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 GZMBP10144 247 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 ADMP35318 185 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 MFAP2P55001 183 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 TAS2R45P59539 299 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 RNASE7Q9H1E1 156 aaKnown RBP11.8□□□□□ -0.52
CBWD3-205ENST00000469687 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 V9GYV3 84 aa11.8□□□□□ -0.52
CBWD3-205ENST00000469687 IGHV3-21A0A0B4J1V1 117 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 NUPR1O60356 82 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 ZNF841Q6ZN19 808 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 RNASEH2CQ8TDP1 164 aaKnown RBP11.79□□□□□ -0.52
CBWD3-205ENST00000469687 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 PRO1933Q9H354 126 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 RALYQ9UKM9 306 aaKnown RBP11.79□□□□□ -0.52
CBWD3-205ENST00000469687 IGLC7A0M8Q6 106 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 GRIFINA4D1Z8 144 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 LY6HO94772 140 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 MOSP00540 346 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
CBWD3-205ENST00000469687 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-205ENST00000469687 MUC15Q8N387 334 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 C19orf24Q9BVV8 132 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 LY96Q9Y6Y9 160 aa11.79□□□□□ -0.52
CBWD3-205ENST00000469687 TCRBV4S1A1TA0A5B7 111 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 COX7A1P24310 79 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 MC5RP33032 325 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 FXYD3Q14802 87 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 C22orf46C9J442 243 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 IGLV2-8P01709 118 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 TNXAQ16473 311 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
CBWD3-205ENST00000469687 MRPL32Q9BYC8 188 aaKnown RBP11.78□□□□□ -0.52
CBWD3-205ENST00000469687 ASH1LQ9NR48 2969 aaKnown RBP11.78□□□□□ -0.52
CBWD3-205ENST00000469687 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 SPINK4O60575 86 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 FSTL3O95633 263 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBWD3-205ENST00000469687 YPEL3P61236 119 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-205ENST00000469687 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 UNQ6494/PRO21346Q6UXR6 183 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 LGALS7P47929 136 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.53
CBWD3-205ENST00000469687 BUB1B-PAK6H3BSN5 160 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 CRYGBP07316 175 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 SLC35B1P78383 322 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 RPEL1Q2QD12 228 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 OR5R1Q8NH85 324 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 BTF3L4Q96K17 158 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 PAXXQ9BUH6 204 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 TP53TG3Q9ULZ0 132 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
CBWD3-205ENST00000469687 PPIAL4CA0A0B4J2A2 164 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 CCL21O00585 134 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 PPIAL4GP0DN37 164 aa11.75□□□□□ -0.53
CBWD3-205ENST00000469687 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms