RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C19orf24Q9BVV8 132 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 NAT8BQ9UHF3 227 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 SH3BGRL2Q9UJC5 107 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 ICE1Q9Y2F5 2266 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 TMEM11P17152 192 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 ATP5IP56385 69 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 CD69Q07108 199 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 LEMD1Q68G75 181 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 OSTCQ9NRP0 149 aa12.83□□□□□ -0.36
TSPAN4-211ENST00000468468 C20orf202A1L168 122 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 NDUFB8O95169 186 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 C8orf88P0DMB2 117 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 PTTG1IPP53801 180 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 SLC35B1P78383 322 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 SLC25A33Q9BSK2 321 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 MGST1P10620 155 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 CDKN1BP46527 198 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 TCL1AP56279 114 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 CX3CL1P78423 397 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 PNKDQ8N490 385 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 Q8NA96 180 aa12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 MRPL20Q9BYC9 149 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-211ENST00000468468 CDKN1AP38936 164 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 MMDQ15546 238 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 TPTE2P1Q5T6R2 138 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 CLEC2AQ6UVW9 174 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 GNB4Q9HAV0 340 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 IGLV2-8P01709 118 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 CCL8P80075 99 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 COL5A1-AS1Q5SY13 56 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 TEX36Q5VZQ5 186 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 WDR73Q6P4I2 378 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 ZNF833PQ6ZTB9 187 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 TNCP24821 2201 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 TRAV5A0A0B4J249 113 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 ISLRO14498 428 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 APOA2P02652 100 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 CD40P25942 277 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 STPG4Q8N801 248 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 OSR1Q8TAX0 266 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 SERTAD4Q9NUC0 356 aa12.81□□□□□ -0.36
TSPAN4-211ENST00000468468 CUL9Q8IWT3 2517 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 MT-ND6P03923 174 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 PPOXP50336 477 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 ZGRF1Q86YA3 2104 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 CBY3A6NI87 242 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 DLL1O00548 723 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 REG1BP48304 166 aa12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 PRR30Q53SZ7 412 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 FAM103A1Q9BTL3 118 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-211ENST00000468468 DYSFO75923 2080 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 A0A0G2JNJ9 132 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 CCL3L1P16619 93 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 RPL8P62917 257 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 SLC25A2Q9BXI2 301 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 MRPL32Q9BYC8 188 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 Q9UFV3 132 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 E7EUB6 86 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 H0YJW9 148 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 TBR1Q16650 682 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
TSPAN4-211ENST00000468468 M0QZ24 198 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 PRRG2O14669 202 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 SSBP2P81877 361 aaPredicted RBP12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 C20orf144Q9BQM9 153 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 PSMB11A5LHX3 300 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 GPX1P07203 203 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 COX19Q49B96 90 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 RNF2Q99496 336 aa12.78□□□□□ -0.36
TSPAN4-211ENST00000468468 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.36
TSPAN4-211ENST00000468468 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.36
TSPAN4-211ENST00000468468 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms