RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 LINC00854A0A1B0GVQ3 168 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 C15orf62A8K5M9 175 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 CORTO00230 105 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 CHEK1O14757 476 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 SULT1A3P0DMM9 295 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 SULT1A4P0DMN0 295 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 ANXA3P12429 323 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 VAMP1P23763 118 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 HTR2BP41595 481 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 BSXQ3C1V8 233 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 LAMTOR1Q6IAA8 161 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 LGI3Q8N145 548 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 TMEM116Q8NCL8 245 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 RNF2Q99496 336 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
CDHR3-205ENST00000468143 HUWE1Q7Z6Z7 4374 aaKnown RBP8.62□□□□□ -1.03
CDHR3-205ENST00000468143 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 A0A1B0GU03 582 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 TSPAN4O14817 238 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 APOHP02749 345 aaPredicted RBP8.62□□□□□ -1.03
CDHR3-205ENST00000468143 TFPI2P48307 235 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 INPP1P49441 399 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 CCR6P51684 374 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 SMCO1Q147U7 214 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 TMEM170AQ8WVE7 144 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 OR10C1Q96KK4 312 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 CITED4Q96RK1 184 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 HIPK2Q9H2X6 1198 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 SHPKQ9UHJ6 478 aa8.62□□□□□ -1.03
CDHR3-205ENST00000468143 PUS1Q9Y606 427 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDHR3-205ENST00000468143 CLN5O75503 358 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 TIGITQ495A1 244 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 C2orf83Q53S99 150 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 NMSQ5H8A3 153 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 ZNF600Q6ZNG1 722 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 LILRB2Q8N423 598 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 GBGT1Q8N5D6 347 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 SLC24A4Q8NFF2 622 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 OR1S1Q8NH92 325 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-205ENST00000468143 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-205ENST00000468143 SLC25A21Q9BQT8 299 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-205ENST00000468143 RBKSQ9H477 322 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
CDHR3-205ENST00000468143 SFT2D2O95562 160 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 IFNA10P01566 189 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 RND2P52198 227 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 SRPXP78539 464 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 PPP1R1AQ13522 171 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 TRIQKQ629K1 86 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 OR4X1Q8NH49 305 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 DTD1Q8TEA8 209 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 ST8SIA2Q92186 375 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 GINS3Q9BRX5 216 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 HSPB7Q9UBY9 170 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 FLVCR2Q9UPI3 526 aa8.6□□□□□ -1.03
CDHR3-205ENST00000468143 LOC102724200A0A096LPH7 203 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-205ENST00000468143 RPS10-NUDT3A0A1W2PQS6 291 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 HOXB5P09067 269 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 NPY1RP25929 384 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 ZFAND6Q6FIF0 208 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 TCF24Q7RTU0 167 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 CENPSQ8N2Z9 138 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 RNASEH2CQ8TDP1 164 aaKnown RBP8.59□□□□□ -1.03
CDHR3-205ENST00000468143 DEDD2Q8WXF8 326 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 NPIPB3Q92617 1050 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 EDA2RQ9HAV5 297 aa8.59□□□□□ -1.03
CDHR3-205ENST00000468143 TRAV30A0A087WSZ9 112 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 DFFBO76075 338 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 IGKV1-17P01599 117 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 IAPPP10997 89 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 NPPCP23582 126 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 RPL11P62913 178 aaKnown RBP8.58□□□□□ -1.04
CDHR3-205ENST00000468143 RBMS2Q15434 407 aaKnown RBP8.58□□□□□ -1.04
CDHR3-205ENST00000468143 ZNF124Q15973 351 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 ODF3L2Q3SX64 289 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 ACY3Q96HD9 319 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
CDHR3-205ENST00000468143 NAP1L6A6NFF2 107 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms