RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TNFRSF19Q9NS68 423 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 GAR1Q9NY12 217 aaKnown RBP8.11□□□□□ -1.11
MSH5-213ENST00000468136 PITPNC1Q9UKF7 332 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 SPTAN1Q13813 2472 aaKnown RBP8.11□□□□□ -1.11
MSH5-213ENST00000468136 A0A087WWC5 75 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 A0A1W2PRD5 423 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 A0A1W2PRF3 423 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 A0A1W2PRM7 423 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 J3QKU1 62 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 C8orf88P0DMB2 117 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 AREGP15514 252 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 FCGR2BP31994 310 aaPredicted RBP8.1□□□□□ -1.11
MSH5-213ENST00000468136 RND2P52198 227 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 FGF8P55075 233 aaPredicted RBP8.1□□□□□ -1.11
MSH5-213ENST00000468136 CX3CL1P78423 397 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 BTN1A1Q13410 526 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 FAM78BQ5VT40 261 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 Q8N9W7 124 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 RPUSD4Q96CM3 377 aaKnown RBP8.1□□□□□ -1.11
MSH5-213ENST00000468136 UHRF2Q96PU4 802 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 TXN2Q99757 166 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 FNDC4Q9H6D8 234 aaPredicted RBP8.1□□□□□ -1.11
MSH5-213ENST00000468136 C7orf69Q9H7B7 122 aa8.1□□□□□ -1.11
MSH5-213ENST00000468136 IGKV1OR2-108A0A075B7D4 117 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 I3L2K1 104 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 M0R036 132 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 FCN1O00602 326 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 COX7A2P2O60397 106 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 GCHFRP30047 84 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
MSH5-213ENST00000468136 PRB3Q04118 309 aaPredicted RBP8.09□□□□□ -1.11
MSH5-213ENST00000468136 SSX7Q7RTT5 188 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 CYB561D1Q8N8Q1 229 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 OR2T6Q8NHC8 308 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 AJUBAQ96IF1 538 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 RBM14Q96PK6 669 aaKnown RBP8.09□□□□□ -1.11
MSH5-213ENST00000468136 SSX3Q99909 188 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 SLC25A33Q9BSK2 321 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 TMEM242Q9NWH2 141 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 MOB4Q9Y3A3 225 aa8.09□□□□□ -1.11
MSH5-213ENST00000468136 A0A1W2PRE2 83 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 C11orf94C9JXX5 98 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 H3BQ15 152 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 DNASE2O00115 360 aaPredicted RBP8.08□□□□□ -1.12
MSH5-213ENST00000468136 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
MSH5-213ENST00000468136 SCO1O75880 301 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 BRI3O95415 125 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 ARL14EPLP0DKL9 152 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
MSH5-213ENST00000468136 MFAP4P55083 255 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 CD81P60033 236 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 C10orf113Q5VZT2 155 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 IQCF2Q8IXL9 164 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 DYNAPQ8N1N2 210 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 C15orf54Q8N8G6 183 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
MSH5-213ENST00000468136 VN1R17PQ8TDU5 208 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 HIF1ANQ9NWT6 349 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 DOK5Q9P104 306 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 NAT8Q9UHE5 227 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 ZNF462Q96JM2 2506 aa8.08□□□□□ -1.12
MSH5-213ENST00000468136 WNK2Q9Y3S1 2297 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 IGLV11-55A0A075B6I3 123 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 IGHV7-81A0A0B4J1V7 117 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 A1L4Q6 167 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 PSMB11A5LHX3 300 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 PAGE4O60829 102 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 HYPMO75409 117 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 REG1AP05451 166 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 MFAP2P55001 183 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 YPEL3P61236 119 aaPredicted RBP8.07□□□□□ -1.12
MSH5-213ENST00000468136 TMEM241Q24JQ0 296 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 AKIRIN2Q53H80 203 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 FAM90A2PQ658T7 463 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 ATRAIDQ6UW56 229 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 OR51G1Q8NGK1 321 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 OR4F5Q8NH21 305 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 OR4F4Q96R69 305 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 SEPSECSQ9HD40 501 aaKnown RBP8.07□□□□□ -1.12
MSH5-213ENST00000468136 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 PUS1Q9Y606 427 aaKnown RBP eCLIP8.07□□□□□ -1.12
MSH5-213ENST00000468136 LY96Q9Y6Y9 160 aa8.07□□□□□ -1.12
MSH5-213ENST00000468136 ARHGAP32A7KAX9 2087 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 KALRNO60229 2985 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 AKAP6Q13023 2319 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 RELNP78509 3460 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 A0A096LNT2 108 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 TRAV40A0A0B4J280 105 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 H3BUA1 57 aa8.06□□□□□ -1.12
MSH5-213ENST00000468136 K7EIM0 57 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms