RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 INS-IGF2F8WCM5 200 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 CORTO00230 105 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 ATG12O94817 140 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 IFNA4P05014 189 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 OPRK1P41145 380 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 STHQ8IWL8 128 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 ARRDC1Q8N5I2 433 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 RNASE11Q8TAA1 199 aaKnown RBP15.39■□□□□ 0.05
COL9A3-207ENST00000467819 FNDC4Q9H6D8 234 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-207ENST00000467819 ENY2Q9NPA8 101 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 COPZ2Q9P299 210 aa15.39■□□□□ 0.05
COL9A3-207ENST00000467819 TRAV2A0A0B4J234 112 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 A0A0G2JRQ6 117 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 NPPCP23582 126 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 MLANAQ16655 118 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 PVRIGQ6DKI7 326 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 STXBP6Q8NFX7 210 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 OR4D10Q8NGI6 311 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 EXTL2Q9UBQ6 330 aa15.38■□□□□ 0.05
COL9A3-207ENST00000467819 CLN5O75503 358 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 SCGB2B2Q4G0G5 96 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 CCDC71LQ8N9Z2 235 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 OR13C8Q8NGS7 320 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 RRNAD1Q96FB5 475 aaKnown RBP15.37■□□□□ 0.05
COL9A3-207ENST00000467819 METTL26Q96S19 204 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 MTFP1Q9UDX5 166 aa15.37■□□□□ 0.05
COL9A3-207ENST00000467819 A0A1W2PS18 150 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 TBPP20226 339 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 OR4X1Q8NH49 305 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 ZFAND1Q8TCF1 268 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 AP3S1Q92572 193 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 TMEM230Q96A57 120 aa15.36■□□□□ 0.05
COL9A3-207ENST00000467819 NAA50Q9GZZ1 169 aaKnown RBP15.36■□□□□ 0.05
COL9A3-207ENST00000467819 K7EQG2 157 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 UCP1P25874 307 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 P2RY1P47900 373 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 TIGITQ495A1 244 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 TERB2Q8NHR7 220 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 MARCH1Q8TCQ1 289 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 C2CD4CQ8TF44 421 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 ABHD1Q96SE0 405 aa15.35■□□□□ 0.05
COL9A3-207ENST00000467819 SCGB2A1O75556 95 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 RAB3DO95716 219 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 ZNF688P0C7X2 276 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 CRYBB3P26998 211 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 Q6ZRM9 215 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 NARS2Q96I59 477 aaKnown RBP15.34■□□□□ 0.05
COL9A3-207ENST00000467819 DNAH6Q9C0G6 4158 aa15.34■□□□□ 0.05
COL9A3-207ENST00000467819 KNCNA6PVL3 124 aa15.33■□□□□ 0.04
COL9A3-207ENST00000467819 IGKV1-17P01599 117 aa15.33■□□□□ 0.04
COL9A3-207ENST00000467819 ZNF182P17025 639 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-207ENST00000467819 RPL5P46777 297 aaKnown RBP15.33■□□□□ 0.04
COL9A3-207ENST00000467819 BSXQ3C1V8 233 aa15.33■□□□□ 0.04
COL9A3-207ENST00000467819 TRPT1Q86TN4 253 aaKnown RBP15.33■□□□□ 0.04
COL9A3-207ENST00000467819 Q8NAQ8 132 aa15.33■□□□□ 0.04
COL9A3-207ENST00000467819 TMEM229BQ8NBD8 167 aa15.33■□□□□ 0.04
COL9A3-207ENST00000467819 IGHV4-28A0A0C4DH34 117 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 CD74P04233 296 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 GIG44P09565 113 aaPredicted RBP15.32■□□□□ 0.04
COL9A3-207ENST00000467819 OR5AC1P0C628 307 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 C4BPBP20851 252 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 TAS2R19P59542 299 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 SPCS3P61009 180 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 PRR20EP86478 221 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 PRR20CP86479 221 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 PRR20DP86480 221 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 PRR20BP86481 221 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 PRR20AP86496 221 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 FAAP20Q6NZ36 180 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 STEAP1BQ6NZ63 245 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 GRAMD2BQ96HH9 432 aa15.32■□□□□ 0.04
COL9A3-207ENST00000467819 IGLL5B9A064 214 aa15.31■□□□□ 0.04
COL9A3-207ENST00000467819 GABARAPO95166 117 aa15.31■□□□□ 0.04
COL9A3-207ENST00000467819 CTF1Q16619 201 aa15.31■□□□□ 0.04
COL9A3-207ENST00000467819 LHFPL5Q8TAF8 219 aa15.31■□□□□ 0.04
COL9A3-207ENST00000467819 TMEM222Q9H0R3 208 aa15.31■□□□□ 0.04
COL9A3-207ENST00000467819 HEYLQ9NQ87 328 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-207ENST00000467819 C14orf166Q9Y224 244 aaKnown RBP15.31■□□□□ 0.04
COL9A3-207ENST00000467819 TRAV30A0A087WSZ9 112 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 RPS10-NUDT3A0A1W2PQS6 291 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 RBMY1A1P0DJD3 496 aaKnown RBP15.3■□□□□ 0.04
COL9A3-207ENST00000467819 RBMY1CP0DJD4 496 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 SPP1P10451 314 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 HTR2BP41595 481 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 RBMY1FQ15415 496 aaKnown RBP15.3■□□□□ 0.04
COL9A3-207ENST00000467819 ACTL10Q5JWF8 245 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 MORN3Q6PF18 240 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-207ENST00000467819 FAM219AQ8IW50 185 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 DCANP1Q8TF63 244 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 C15orf40Q8WUR7 153 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-207ENST00000467819 CACNG5Q9UF02 275 aa15.3■□□□□ 0.04
COL9A3-207ENST00000467819 HECTD4Q9Y4D8 3996 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 TEX13DA0A0J9YY54 714 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-207ENST00000467819 CDS2O95674 445 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 RND2P52198 227 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 DHRS2Q13268 280 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 TMEM41BQ5BJD5 291 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 GPR107Q5VW38 600 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms