RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PAFAH1B2P68402 229 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 ARFRP1Q13795 201 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 OR2G6Q5TZ20 316 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 KDM4DQ6B0I6 523 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 PRR27Q6MZM9 219 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 TCF24Q7RTU0 167 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 LHFPL3Q86UP9 236 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 AQP12AQ8IXF9 295 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 CDH26Q8IXH8 852 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 FAM24BQ8N5W8 94 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 THAP8Q8NA92 274 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 VSTM2AQ8TAG5 236 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 VN1R17PQ8TDU5 208 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 MOB3AQ96BX8 217 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 CCDC124Q96CT7 223 aaKnown RBP2.85□□□□□ -1.95
SSR3-204ENST00000467733 ZNF414Q96IQ9 312 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 NIPSNAP3BQ9BS92 247 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 HDHD3Q9BSH5 251 aaPredicted RBP2.85□□□□□ -1.95
SSR3-204ENST00000467733 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 GABARAPL3Q9BY60 117 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 GABARAPL1Q9H0R8 117 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 MS4A6AQ9H2W1 248 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 RIMS4Q9H426 269 aaPredicted RBP2.85□□□□□ -1.95
SSR3-204ENST00000467733 C12orf4Q9NQ89 552 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 CLEC5AQ9NY25 188 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 CKLFQ9UBR5 152 aa2.85□□□□□ -1.95
SSR3-204ENST00000467733 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 IGLC7A0M8Q6 106 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 KNCNA6PVL3 124 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 DNASE2O00115 360 aaPredicted RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 NUPL2O15504 423 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 CYB5BO43169 146 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 FKBP6O75344 327 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 DCTN3O75935 186 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 DIRAS3O95661 229 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 UBBP0CG47 229 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 CELP19835 753 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 NKX2-1P43699 371 aaPredicted RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 SERPINB10P48595 397 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 GTF2A1P52655 376 aaPredicted RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 RPL8P62917 257 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 ZNF415Q09FC8 603 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 OXA1LQ15070 435 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 CCDC58Q4VC31 144 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 XAF1Q6GPH4 301 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 RPL22L1Q6P5R6 122 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 LRRTM1Q86UE6 522 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 VKORC1L1Q8N0U8 176 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 PUSL1Q8N0Z8 303 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 NKAIN3Q8N8D7 197 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 OR6M1Q8NGM8 313 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 OR4A4PQ8NGN8 299 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 TMEM167AQ8TBQ9 72 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 GGHQ92820 318 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 DGCR14Q96DF8 476 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 SMIM19Q96E16 107 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 OR10C1Q96KK4 312 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 CIB1Q99828 191 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 UQCC2Q9BRT2 126 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 CABLES2Q9BTV7 478 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 TM2D1Q9BX74 207 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 TMEM59Q9BXS4 323 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 FAM107BQ9H098 131 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 OR51E2Q9H255 320 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 Q9H3A6 140 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 Q9N2K0 584 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 THYN1Q9P016 225 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 GHRLQ9UBU3 117 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 AK3Q9UIJ7 227 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 MRPS7Q9Y2R9 242 aaKnown RBP2.84□□□□□ -1.95
SSR3-204ENST00000467733 RFNGQ9Y644 331 aa2.84□□□□□ -1.95
SSR3-204ENST00000467733 IGHV3OR16-13A0A075B7E8 117 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 A0A0A6YYD4 124 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 IGHV3-74A0A0B4J1X5 117 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 A0A1W2PPQ1 181 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 TCRBV3S1A0A5B6 114 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 SMIM9A6NGZ8 99 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 SNTNA6NMZ2 147 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 ZNF705FA8MVS1 300 aaPredicted RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 TRDCB7Z8K6 153 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 BET1O15155 118 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 FABP7O15540 132 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 ST8SIA3O43173 380 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 FCGR3BO75015 233 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 EIF4EP06730 217 aaKnown RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 ZNF705BP0CI00 300 aaPredicted RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 HLA-GP17693 338 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 HTR2CP28335 458 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 GNRHRP30968 328 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 FUSP35637 526 aaKnown RBP eCLIP2.83□□□□□ -1.96
SSR3-204ENST00000467733 POLR2IP36954 125 aaKnown RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 ALDH3B2P48448 385 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 EMP1P54849 157 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 CCL18P55774 89 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 OR2B8PP59922 312 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 ATP6AP1Q15904 470 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 SSX1Q16384 188 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms