RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TMEM223A0PJW6 202 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 C1orf196B1AJZ1 125 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 H7BYZ3 331 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 CORTO00230 105 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 NDUFB2O95178 105 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 NCR2O95944 276 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 IGKV1D-12P01611 117 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 GPX1P07203 203 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 KDELR1P24390 212 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 FKBP2P26885 142 aaKnown RBP2.42□□□□□ -2.02
VPS50-209ENST00000467326 CXCL12P48061 93 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 CMC4P56277 68 aaPredicted RBP2.42□□□□□ -2.02
VPS50-209ENST00000467326 AKR1C1Q04828 323 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 ZNF678Q5SXM1 525 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 GLYATL3Q5SZD4 288 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 FAM104BQ5XKR9 115 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 TEX261Q6UWH6 196 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 MSRB3Q8IXL7 192 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 DAND5Q8N907 189 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 ZNF418Q8TF45 676 aaPredicted RBP2.42□□□□□ -2.02
VPS50-209ENST00000467326 ITLN2Q8WWU7 325 aaPredicted RBP2.42□□□□□ -2.02
VPS50-209ENST00000467326 MGLLQ99685 303 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 B9D2Q9BPU9 175 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 DERL1Q9BUN8 251 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 KLK5Q9Y337 293 aaPredicted RBP2.42□□□□□ -2.02
VPS50-209ENST00000467326 PHLDA3Q9Y5J5 127 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 EEA1Q15075 1411 aa2.42□□□□□ -2.02
VPS50-209ENST00000467326 C2orf16Q68DN1 1984 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 KMT2EQ8IZD2 1858 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 NCAPD3P42695 1498 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 CCDC18Q5T9S5 1454 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 J3QQQ9 107 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 ZNF324O75467 553 aaPredicted RBP2.41□□□□□ -2.02
VPS50-209ENST00000467326 IGKV1-5P01602 117 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 C1QAP02745 245 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 IGKV3-11P04433 115 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 OR5AC1P0C628 307 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 INAFM2P0DMQ5 153 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H1BP16401 226 aaKnown RBP2.41□□□□□ -2.02
VPS50-209ENST00000467326 NPPCP23582 126 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 AQP4P55087 323 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 MAXP61244 160 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 UBE2BP63146 152 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 IL17AQ16552 155 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 COL5A1-AS1Q5SY13 56 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 AMMECR1LQ6DCA0 310 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 GTF2H5Q6ZYL4 71 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 LHFPL1Q86WI0 220 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 OR11G2Q8NGC1 345 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 OR5C1Q8NGR4 320 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BAQ96A08 127 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 SLC25A46Q96AG3 418 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 TSSK6Q9BXA6 273 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 GABARAPL1Q9H0R8 117 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 SOX21Q9Y651 276 aaPredicted RBP2.41□□□□□ -2.02
VPS50-209ENST00000467326 ARHGEF11O15085 1522 aa2.41□□□□□ -2.02
VPS50-209ENST00000467326 GPATCH8Q9UKJ3 1502 aaKnown RBP2.41□□□□□ -2.02
VPS50-209ENST00000467326 CEP170Q5SW79 1584 aa2.4□□□□□ -2.02
VPS50-209ENST00000467326 BAZ2AQ9UIF9 1905 aaKnown RBP2.4□□□□□ -2.02
VPS50-209ENST00000467326 SPEF2Q9C093 1822 aa2.4□□□□□ -2.02
VPS50-209ENST00000467326 TCOF1Q13428 1488 aaKnown RBP2.4□□□□□ -2.02
VPS50-209ENST00000467326 IGHV1-58A0A0C4DH39 117 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 IGHV3-64DA0A0J9YX35 117 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 LOC107984640A0A0U1RRK4 108 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 GRIFINA4D1Z8 144 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 ZNF860A6NHJ4 632 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 TMEM212A6NML5 194 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 IFITM5A6NNB3 132 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 C19orf84I3L1E1 186 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 UBFD1O14562 309 aaKnown RBP2.4□□□□□ -2.03
VPS50-209ENST00000467326 OR2T1O43869 369 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 IGHV1-46P01743 117 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 APODP05090 189 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 CD28P10747 220 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 FABP2P12104 132 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 CRHBPP24387 322 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 TMBIM6P55061 237 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 MRPL51Q4U2R6 128 aaKnown RBP2.4□□□□□ -2.03
VPS50-209ENST00000467326 PABPC1L2AQ5JQF8 200 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 LINC00299Q6ZSB3 139 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 LINC00305Q7Z4B0 112 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 LINC01560Q8TB33 94 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 FNDC9Q8TBE3 224 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 NAT14Q8WUY8 206 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 PLA2G12AQ9BZM1 189 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 FAM60AQ9NP50 221 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 OTORQ9NRC9 128 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 CBLN4Q9NTU7 201 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 ZNF586Q9NXT0 402 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 METTL1Q9UBP6 276 aaKnown RBP2.4□□□□□ -2.03
VPS50-209ENST00000467326 SPATA31E1Q6ZUB1 1445 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 NSD3Q9BZ95 1437 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 RRBP1Q9P2E9 1410 aaKnown RBP2.4□□□□□ -2.03
VPS50-209ENST00000467326 TRAPPC8Q9Y2L5 1435 aa2.4□□□□□ -2.03
VPS50-209ENST00000467326 ARHGAP23Q9P227 1491 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms