RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PSMA1P25786 263 aaKnown RBP4□□□□□ -1.77
PTCD3-207ENST00000467273 KRTAP5-9P26371 169 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 KIR2DS2P43631 304 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 MAP2K4P45985 399 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 CLDN12P56749 244 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 CDK5R1Q15078 307 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 ECSCRQ19T08 205 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 RSBN1Q5VWQ0 802 aaPredicted RBP4□□□□□ -1.77
PTCD3-207ENST00000467273 GLYATQ6IB77 296 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 FAM220AQ7Z4H9 259 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 SLC35F2Q8IXU6 374 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 MMD2Q8IY49 270 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 OR10K1Q8NGX5 313 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 SMIM19Q96E16 107 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 CCDC90BQ9GZT6 254 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 COA4Q9NYJ1 87 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 MDFICQ9P1T7 246 aa4□□□□□ -1.77
PTCD3-207ENST00000467273 DNAH2Q9P225 4427 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 A0A0G2JND7 137 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 A6NIN4 97 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 C11orf94C9JXX5 98 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SDCBPO00560 298 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 RTL8CO15255 209 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SSNA1O43805 119 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ORC5O43913 435 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SOX14O95416 240 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ATP6V1G2O95670 118 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 MT-ND4P03905 459 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 AKR1C4P17516 323 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SLC2A5P22732 501 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 RCVRNP35243 200 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 CEACAM6P40199 344 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 CCR6P51684 374 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 OR10A3P58181 314 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 NUTF2P61970 127 aaKnown RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 RPL32P62910 135 aaKnown RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 CX3CL1P78423 397 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 NDPQ00604 133 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 MS4A2Q01362 244 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ZNF415Q09FC8 603 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 LTC4SQ16873 150 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 MICAQ29983 383 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 DEFB114Q30KQ6 69 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 UNQ5815/PRO19632Q6UWF5 114 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 CMTM1Q8IZ96 169 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 MS4A15Q8N5U1 240 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 AQP11Q8NBQ7 271 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ZNF439Q8NDP4 499 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 CNIH3Q8TBE1 160 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 DYNLRB2Q8TF09 96 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 USMG5Q96IX5 58 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 C11orf68Q9H3H3 251 aaKnown RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 SPANXB1Q9NS25 103 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 RCL1Q9Y2P8 373 aaKnown RBP3.99□□□□□ -1.77
PTCD3-207ENST00000467273 ALG5Q9Y673 324 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 DNAH11Q96DT5 4516 aa3.99□□□□□ -1.77
PTCD3-207ENST00000467273 IGKV1-9A0A0C4DH69 117 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 IGKV1-12A0A0C4DH73 117 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 C15orf65H3BRN8 121 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 K7EP13 123 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 TNFRSF11BO00300 401 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 EDF1O60869 148 aaKnown RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 SULT1C4O75897 302 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 DCTN3O75935 186 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 IGKV1D-12P01611 117 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 LEPP41159 167 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 GUCA2BQ16661 112 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 LGALS9BQ3B8N2 356 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 OR4A47Q6IF82 309 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 ZNF322Q6U7Q0 402 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 MRPL52Q86TS9 123 aaKnown RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 CENPSQ8N2Z9 138 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 DHRSXQ8N5I4 330 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 CCDC107Q8WV48 283 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 ARL11Q969Q4 196 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 RCN3Q96D15 328 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 CPNE2Q96FN4 548 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 RNF5Q99942 180 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 TMEM208Q9BTX3 173 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 WFDC10AQ9H1F0 79 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 EFCAB1Q9HAE3 211 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 FGF20Q9NP95 211 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-207ENST00000467273 SAR1AQ9NR31 198 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 APLNQ9ULZ1 77 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 HSPG2P98160 4391 aa3.98□□□□□ -1.77
PTCD3-207ENST00000467273 TRAV8-7A0A075B6U6 113 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 SAA2-SAA4A0A096LPE2 208 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 A0A1B0GU03 582 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 ANKRD20A5PA0PJZ0 165 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 TMEM30CPA0ZSE6 113 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 PRR32B1ATL7 298 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 DLEU1O43261 78 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms