RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 C1orf137Q5JT78 98 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 SOSTDC1Q6X4U4 206 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 SIGLECL1Q8N7X8 197 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 PATE1Q8WXA2 126 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 SMR3AQ99954 134 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 MIXL1Q9H2W2 232 aa0.21□□□□□ -2.38
SMC4-207ENST00000467263 C11orf68Q9H3H3 251 aaKnown RBP0.21□□□□□ -2.38
SMC4-207ENST00000467263 TRAV3A0A0B4J244 114 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 SLC16A4O15374 487 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 MAGEA2P43356 314 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 EFNA4P52798 201 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 DEFB113Q30KQ7 82 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 SPRNQ5BIV9 151 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 HIST2H3PS2Q5TEC6 136 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 HIST3H2BBQ8N257 126 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 H1FXQ92522 213 aaKnown RBP0.2□□□□□ -2.38
SMC4-207ENST00000467263 SLC39A9Q9NUM3 307 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 ERGIC3Q9Y282 383 aa0.2□□□□□ -2.38
SMC4-207ENST00000467263 ASH1LQ9NR48 2969 aaKnown RBP0.19□□□□□ -2.38
SMC4-207ENST00000467263 COL1A1P02452 1464 aaPredicted RBP0.19□□□□□ -2.38
SMC4-207ENST00000467263 DPRXA6NFQ7 191 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 ZNF736B4DX44 427 aaPredicted RBP0.19□□□□□ -2.38
SMC4-207ENST00000467263 BUB1B-PAK6H3BSN5 160 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 TCL1BO95988 128 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 DNAL4O96015 105 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 HLA-DRB1P01911 266 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 CD200R1LQ6Q8B3 271 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 LSM5Q9Y4Y9 91 aaKnown RBP0.19□□□□□ -2.38
SMC4-207ENST00000467263 MTUS2Q5JR59 1369 aa0.19□□□□□ -2.38
SMC4-207ENST00000467263 OR2B3O76000 313 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 PROSCO94903 275 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 OR5G3P0C626 314 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 TMED1Q13445 227 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 LPCAT3Q6P1A2 487 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 CLECL1Q8IZS7 167 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 C3orf56Q8N813 242 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 OR52R1Q8NGF1 315 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 OR10J5Q8NHC4 309 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 SLC35B4Q969S0 331 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 TOMM6Q96B49 74 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 NIPSNAP1Q9BPW8 284 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 COMMD5Q9GZQ3 224 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 USE1Q9NZ43 259 aa0.18□□□□□ -2.38
SMC4-207ENST00000467263 ASCC3Q8N3C0 2202 aaKnown RBP0.18□□□□□ -2.38
SMC4-207ENST00000467263 TRAV9-1A0A075B6T8 112 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 FAAHO00519 579 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 ISG15P05161 165 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 AP2S1P53680 142 aaPredicted RBP0.17□□□□□ -2.38
SMC4-207ENST00000467263 DEFA1P59665 94 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 CDC42P60953 191 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 CACNA1EQ15878 2313 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 GPR146Q96CH1 333 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 PRTFDC1Q9NRG1 225 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 ECM29Q5VYK3 1845 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 ALPK3Q96L96 1907 aa0.17□□□□□ -2.38
SMC4-207ENST00000467263 EXOC1LA0A1B0GW35 172 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 CCL25O15444 150 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 IFNA10P01566 189 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 SNRPD2P62316 118 aaKnown RBP0.16□□□□□ -2.38
SMC4-207ENST00000467263 PSG9Q00887 426 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 GKN2Q86XP6 184 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 TMEM86BQ8N661 226 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 HS3ST2Q9Y278 367 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 PKIGQ9Y2B9 76 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 HECW1Q76N89 1606 aa0.16□□□□□ -2.38
SMC4-207ENST00000467263 TGIF2-C20orf24A0A0A6YYL0 155 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 PSMD12O00232 456 aaPredicted RBP0.15□□□□□ -2.39
SMC4-207ENST00000467263 TNNC2P02585 160 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 RPL5P46777 297 aaKnown RBP0.15□□□□□ -2.39
SMC4-207ENST00000467263 RPS20P60866 119 aaKnown RBP0.15□□□□□ -2.39
SMC4-207ENST00000467263 ANKRD29Q8N6D5 301 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 OR13D1Q8NGV5 346 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 PPP1R2P1Q96PQ5 205 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 OSTCQ9NRP0 149 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 SLC35A3Q9Y2D2 325 aa0.15□□□□□ -2.39
SMC4-207ENST00000467263 ZNF106Q9H2Y7 1883 aaKnown RBP0.15□□□□□ -2.39
SMC4-207ENST00000467263 C9orf84Q5VXU9 1444 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 TGOLN2O43493 480 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 DCTN3O75935 186 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 HIST1H1TP22492 207 aaPredicted RBP0.14□□□□□ -2.39
SMC4-207ENST00000467263 C20orf196Q8IYI0 205 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 OR51V1Q9H2C8 321 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 EPDR1Q9UM22 224 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 TMEM56-RWDD3S4R434 201 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 TAF1LQ8IZX4 1826 aa0.14□□□□□ -2.39
SMC4-207ENST00000467263 OR2T8A6NH00 312 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 KLF7O75840 302 aaPredicted RBP0.13□□□□□ -2.39
SMC4-207ENST00000467263 OR2J2O76002 312 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 CALB1P05937 261 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 SPCS3P61009 180 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 FAM74A1Q5RGS3 127 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 C4orf3Q8WVX3 66 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 PTH2Q96A98 100 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 TLNRD1Q9H1K6 362 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 NIT2Q9NQR4 276 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 V9GYY5 206 aaPredicted RBP0.13□□□□□ -2.39
SMC4-207ENST00000467263 PLXND1Q9Y4D7 1925 aa0.13□□□□□ -2.39
SMC4-207ENST00000467263 KIAA1549Q9HCM3 1950 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 SBF1O95248 1867 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms