RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 CACNG5Q9UF02 275 aa12.73□□□□□ -0.37
TOM1-213ENST00000465529 A0A1B0GU03 582 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 TMEM50AO95807 157 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 SURF2Q15527 256 aaPredicted RBP12.72□□□□□ -0.37
TOM1-213ENST00000465529 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 MCFD2Q8NI22 146 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 ST8SIA2Q92186 375 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
TOM1-213ENST00000465529 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
TOM1-213ENST00000465529 TRAV14DV4A0A0A6YYC5 116 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 LCE6AA0A183 80 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 FABP12A6NFH5 140 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 B3GALNT1O75752 331 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
TOM1-213ENST00000465529 OPRK1P41145 380 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 NPBWR1P48145 328 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 BSXQ3C1V8 233 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 PRRT1Q99946 306 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 MCUBQ9NWR8 336 aa12.71□□□□□ -0.37
TOM1-213ENST00000465529 DNAH1Q9P2D7 4330 aa12.71□□□□□ -0.38
TOM1-213ENST00000465529 SPCS3P61009 180 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 DHODHQ02127 395 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 TMEM187Q14656 261 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 DEFB135Q30KP9 77 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 AARDQ4LEZ3 155 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
TOM1-213ENST00000465529 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.7□□□□□ -0.38
TOM1-213ENST00000465529 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
TOM1-213ENST00000465529 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOM1-213ENST00000465529 SUPT4H1P63272 117 aaKnown RBP12.69□□□□□ -0.38
TOM1-213ENST00000465529 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOM1-213ENST00000465529 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
TOM1-213ENST00000465529 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
TOM1-213ENST00000465529 TMEM170AQ8WVE7 144 aa12.69□□□□□ -0.38
TOM1-213ENST00000465529 RABL2AQ9UBK7 228 aaPredicted RBP12.69□□□□□ -0.38
TOM1-213ENST00000465529 RABL2BQ9UNT1 228 aa12.69□□□□□ -0.38
TOM1-213ENST00000465529 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
TOM1-213ENST00000465529 CEBPZOSA8MTT3 80 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 CORTO00230 105 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 CLN5O75503 358 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 DFFBO76075 338 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 AKR1C4P17516 323 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 TIGITQ495A1 244 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 TRIM63Q969Q1 353 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 VSIRQ9H7M9 311 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 MAP6D1Q9H9H5 199 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
TOM1-213ENST00000465529 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 V9GYH0 126 aa12.68□□□□□ -0.38
TOM1-213ENST00000465529 CCDC160A6NGH7 325 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 APOC4P55056 127 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
TOM1-213ENST00000465529 ZNF79Q15937 498 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 OR4X1Q8NH49 305 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
TOM1-213ENST00000465529 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 IGKV1-17P01599 117 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 HTR2BP41595 481 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 PYDC2Q56P42 97 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 SLC24A4Q8NFF2 622 aa12.66□□□□□ -0.38
TOM1-213ENST00000465529 SPRY2O43597 315 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 RND2P52198 227 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 C2orf83Q53S99 150 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 RBM38Q9H0Z9 239 aaKnown RBP12.65□□□□□ -0.38
TOM1-213ENST00000465529 MS4A6AQ9H2W1 248 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
TOM1-213ENST00000465529 EPPK1P58107 5090 aaKnown RBP12.65□□□□□ -0.38
TOM1-213ENST00000465529 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
TOM1-213ENST00000465529 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
TOM1-213ENST00000465529 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 LEMD1Q68G75 181 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 Q6ZWC4 215 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 TMED4Q7Z7H5 227 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 LYG2Q86SG7 212 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 STPG3Q8N7X2 389 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
TOM1-213ENST00000465529 AGRNO00468 2067 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 NPPCP23582 126 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 NPY1RP25929 384 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 DEFB131AP59861 70 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 PMS2P11Q13670 270 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 RNF183Q96D59 192 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 SCGB3A2Q96PL1 93 aa12.63□□□□□ -0.39
TOM1-213ENST00000465529 RBKSQ9H477 322 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms