RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ATP5IP56385 69 aaPredicted RBP15.45■□□□□ 0.06
SKA3-205ENST00000465471 FAM106AQ4KMX7 169 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 UNQ9165/PRO28630Q6UXU0 137 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 NOXA1Q86UR1 476 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 C12orf45Q8N5I9 185 aaPredicted RBP15.45■□□□□ 0.06
SKA3-205ENST00000465471 UBAC2Q8NBM4 344 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 MARVELD1Q9BSK0 173 aa15.45■□□□□ 0.06
SKA3-205ENST00000465471 MRPL36Q9P0J6 103 aaKnown RBP15.45■□□□□ 0.06
SKA3-205ENST00000465471 OPRK1P41145 380 aa15.44■□□□□ 0.06
SKA3-205ENST00000465471 TMEM190Q8WZ59 177 aa15.44■□□□□ 0.06
SKA3-205ENST00000465471 TMEM213A2RRL7 107 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 C2orf70A6NJV1 201 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 C15orf62A8K5M9 175 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 NDUFA4O00483 81 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 IFNA10P01566 189 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 IAPPP10997 89 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 NPBWR1P48145 328 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 MLANAQ16655 118 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 IAH1Q2TAA2 248 aaPredicted RBP15.43■□□□□ 0.06
SKA3-205ENST00000465471 ZBTB8BQ8NAP8 495 aaPredicted RBP15.43■□□□□ 0.06
SKA3-205ENST00000465471 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 CIB3Q96Q77 187 aaPredicted RBP15.43■□□□□ 0.06
SKA3-205ENST00000465471 MAGT1Q9H0U3 335 aa15.43■□□□□ 0.06
SKA3-205ENST00000465471 SORL1Q92673 2214 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 IGHV3-35A0A0C4DH35 117 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 RPS10-NUDT3A0A1W2PQS6 291 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 INMT-MINDY4F8WBC2 141 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 NUPL2O15504 423 aaKnown RBP15.42■□□□□ 0.06
SKA3-205ENST00000465471 GNG7O60262 68 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 PRAF2O60831 178 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 LY86O95711 162 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 EDN2P20800 178 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 NKX2-1P43699 371 aaPredicted RBP15.42■□□□□ 0.06
SKA3-205ENST00000465471 ELLP55199 621 aaPredicted RBP15.42■□□□□ 0.06
SKA3-205ENST00000465471 HAPLN4Q86UW8 402 aa15.42■□□□□ 0.06
SKA3-205ENST00000465471 WI2-2373I1.2A0A1W2PRP0 233 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 CCSO14618 274 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 CLN5O75503 358 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 TMEM50AO95807 157 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 SLC25A4P12235 298 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 RELQ04864 619 aaPredicted RBP15.41■□□□□ 0.06
SKA3-205ENST00000465471 PRSS54Q6PEW0 395 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 TMEM116Q8NCL8 245 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 PALMDQ9NP74 551 aa15.41■□□□□ 0.06
SKA3-205ENST00000465471 ZNF256Q9Y2P7 627 aaPredicted RBP15.41■□□□□ 0.06
SKA3-205ENST00000465471 ZNF320A2RRD8 509 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 SNRPGP15A8MWD9 76 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 K7EIL1 84 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 C8orf88P0DMB2 117 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 FOLR2P14207 255 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 SPNP16150 400 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 POLR2GP62487 172 aaKnown RBP eCLIP15.4■□□□□ 0.06
SKA3-205ENST00000465471 CD69Q07108 199 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 GPN1Q9HCN4 374 aaPredicted RBP15.4■□□□□ 0.06
SKA3-205ENST00000465471 UFC1Q9Y3C8 167 aa15.4■□□□□ 0.06
SKA3-205ENST00000465471 WRBO00258 174 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 CBLN1P23435 193 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 TM4SF20Q53R12 229 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 ETFRF1Q6IPR1 90 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 SLC16A13Q7RTY0 426 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 UXS1Q8NBZ7 420 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 OR2K2Q8NGT1 345 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 CACNG8Q8WXS5 425 aa15.39■□□□□ 0.05
SKA3-205ENST00000465471 PRSS46E5RG02 174 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 K7EMT4 169 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 PTTG1O95997 202 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 IGKV1-17P01599 117 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 RND2P52198 227 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 MARC2Q969Z3 335 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 PRR25Q96S07 402 aa15.38■□□□□ 0.05
SKA3-205ENST00000465471 DAZ1Q9NQZ3 744 aaKnown RBP15.38■□□□□ 0.05
SKA3-205ENST00000465471 RCL1Q9Y2P8 373 aaKnown RBP15.38■□□□□ 0.05
SKA3-205ENST00000465471 SSSCA1O60232 199 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 MBPP02686 304 aaPredicted RBP15.37■□□□□ 0.05
SKA3-205ENST00000465471 IFNA4P05014 189 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 IGLC1P0CG04 106 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 GPX4P36969 197 aaPredicted RBP15.37■□□□□ 0.05
SKA3-205ENST00000465471 PAX9P55771 341 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 RPP30P78346 268 aaKnown RBP15.37■□□□□ 0.05
SKA3-205ENST00000465471 IL15RAQ13261 267 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 DEFB114Q30KQ6 69 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 ZNF600Q6ZNG1 722 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 SMIM8Q96KF7 97 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 C2orf50Q96LR7 162 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 ZFAND3Q9H8U3 227 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 TECRQ9NZ01 308 aaKnown RBP15.37■□□□□ 0.05
SKA3-205ENST00000465471 MRPL27Q9P0M9 148 aaKnown RBP15.37■□□□□ 0.05
SKA3-205ENST00000465471 GSKIPQ9P0R6 139 aa15.37■□□□□ 0.05
SKA3-205ENST00000465471 TRAV30A0A087WSZ9 112 aa15.36■□□□□ 0.05
SKA3-205ENST00000465471 RAB11AP62491 216 aa15.36■□□□□ 0.05
SKA3-205ENST00000465471 MRAPQ8TCY5 172 aa15.36■□□□□ 0.05
SKA3-205ENST00000465471 MLXQ9UH92 298 aa15.36■□□□□ 0.05
SKA3-205ENST00000465471 IZUMO1RA6ND01 250 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 C5orf51A6NDU8 294 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 FAM25EA8MYX2 175 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 H3BP45 60 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 SCGB1D2O95969 90 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 GP9P14770 177 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 TAS2R30P59541 319 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 CD300EQ496F6 205 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms