RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 CDS2O95674 445 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 HOXA1P49639 335 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 SURF2Q15527 256 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 SP6Q3SY56 376 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 SCGB2B2Q4G0G5 96 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 OR4X1Q8NH49 305 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 MARCH1Q8TCQ1 289 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 TMEM222Q9H0R3 208 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 A0A1B0GU03 582 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 A0A1W2PS18 150 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 CLN5O75503 358 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 APOHP02749 345 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 SPCS3P61009 180 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 LILRB2Q8N423 598 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 MS4A6AQ9H2W1 248 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 FNDC4Q9H6D8 234 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 RABL2AQ9UBK7 228 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-203ENST00000463988 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 DISC1C4P0D8 188 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 DNASE2O00115 360 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 RGS5O15539 181 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 NPPCP23582 126 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 OPRK1P41145 380 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 HTR2BP41595 481 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 ALDH3B2P48448 385 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 DHODHQ02127 395 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 ZNF124Q15973 351 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 Q6ZRM9 215 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 GPR141Q7Z602 305 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 GLYATL2Q8WU03 294 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 SMIM4Q8WVI0 70 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 RBPMSQ93062 196 aaKnown RBP10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 RARRES2Q99969 163 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 MRPS26Q9BYN8 205 aaKnown RBP10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 NAA60Q9H7X0 242 aa10.55□□□□□ -0.72
SNRNP40-203ENST00000463988 TEX13DA0A0J9YY54 714 aaPredicted RBP10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 CTDSP2O14595 271 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 CTDSPLO15194 276 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 OR5AC1P0C628 307 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 CRYBB3P26998 211 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 METTL26Q96S19 204 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
SNRNP40-203ENST00000463988 LY6G6CO95867 125 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 SPCS2Q15005 226 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 MLANAQ16655 118 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 C2orf83Q53S99 150 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 LHFPL5Q8TAF8 219 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 TMEM230Q96A57 120 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 GPR132Q9UNW8 380 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 TMEM56-RWDD3S4R434 201 aa10.53□□□□□ -0.72
SNRNP40-203ENST00000463988 IGHV3-66A0A0C4DH42 116 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 CRYM-AS1A6NIL9 109 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 SLC25A4P12235 298 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 DEFB131AP59861 70 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 FAAP20Q6NZ36 180 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 OR4C16Q8NGL9 310 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 PHLDA1Q8WV24 401 aaPredicted RBP10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 PRRT1Q99946 306 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 BCL7BQ9BQE9 202 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 MFFQ9GZY8 342 aa10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 HEYLQ9NQ87 328 aaPredicted RBP10.52□□□□□ -0.73
SNRNP40-203ENST00000463988 K7EQG2 157 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 CA1P00915 261 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 P2RY1P47900 373 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 TMEM187Q14656 261 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 TIGITQ495A1 244 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 OR1S2Q8NGQ3 325 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 RAB2BQ8WUD1 216 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 IL22RA2Q969J5 263 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms