RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 IGHV4-39P01824 125 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 RND2P52198 227 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 SSX2Q16385 188 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 NANPQ8TBE9 248 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 SAV1Q9H4B6 383 aaPredicted RBP8.1□□□□□ -1.11
MSH5-211ENST00000463144 IGHV3-21A0A0B4J1V1 117 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 C1orf196B1AJZ1 125 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 CLN5O75503 358 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 NDUFA3O95167 84 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 MMDQ15546 238 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 NPBQ8NG41 125 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 OR1P1Q8NH06 330 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 BBC3Q96PG8 261 aaPredicted RBP8.09□□□□□ -1.11
MSH5-211ENST00000463144 C19orf24Q9BVV8 132 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 TECRQ9NZ01 308 aaKnown RBP8.09□□□□□ -1.11
MSH5-211ENST00000463144 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.11
MSH5-211ENST00000463144 F11RQ9Y624 299 aaKnown RBP8.09□□□□□ -1.11
MSH5-211ENST00000463144 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 IGHV2-70DA0A0C4DH43 119 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 F6UZH7 168 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 CLDN34H7C241 214 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 NBR2O15453 112 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 MOSP00540 346 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 PLGLAQ15195 96 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 TXNDC17Q9BRA2 123 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 DNAJC4Q9NNZ3 241 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 DOK5Q9P104 306 aa8.09□□□□□ -1.11
MSH5-211ENST00000463144 COL12A1Q99715 3063 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 AKAP6Q13023 2319 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 TRBV20OR9-2A0A075B6H5 130 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 PGPEP1LA6NFU8 196 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 MT-CO2P00403 227 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 RAB5BP61020 215 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 C16orf82Q7Z2V1 217 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
MSH5-211ENST00000463144 TMEM116Q8NCL8 245 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 AJUBAQ96IF1 538 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 TBX15Q96SF7 602 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 SLC25A2Q9BXI2 301 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 MED13LQ71F56 2210 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 FLNCQ14315 2725 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 PRB1P04280 392 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 OR10J4P0C629 311 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 C8orf88P0DMB2 117 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 ETFRF1Q6IPR1 90 aa8.08□□□□□ -1.12
MSH5-211ENST00000463144 GSX1Q9H4S2 264 aaPredicted RBP8.08□□□□□ -1.12
MSH5-211ENST00000463144 AURKAIP1Q9NWT8 199 aaPredicted RBP8.08□□□□□ -1.12
MSH5-211ENST00000463144 TOX4O94842 621 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 CNIH1O95406 144 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
MSH5-211ENST00000463144 HES1Q14469 280 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 MINOS1Q5TGZ0 78 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 PQLC2Q6ZP29 291 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 LINC01551Q86U37 167 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 Q8N6K4 173 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 OR4X1Q8NH49 305 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 UHRF2Q96PU4 802 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 FAM103A1Q9BTL3 118 aaKnown RBP8.07□□□□□ -1.12
MSH5-211ENST00000463144 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 BIN3Q9NQY0 253 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 TMEM167BQ9NRX6 74 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 TNFRSF19Q9NS68 423 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 MINOS1-NBL1R4GNA1 71 aa8.07□□□□□ -1.12
MSH5-211ENST00000463144 I3L2K1 104 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 OR7C2O60412 319 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 PFN1P07737 140 aaKnown RBP8.06□□□□□ -1.12
MSH5-211ENST00000463144 SELENOTP62341 195 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 EBI3Q14213 229 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 C5orf64Q2M2E5 130 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 OR2T10Q8NGZ9 312 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 C11orf52Q96A22 123 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 MRPL32Q9BYC8 188 aaKnown RBP8.06□□□□□ -1.12
MSH5-211ENST00000463144 WNK2Q9Y3S1 2297 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 OOSP1A8MZH6 123 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 CORTO00230 105 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 COX7A2P2O60397 106 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 TAS2R45P59539 299 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
MSH5-211ENST00000463144 FXYD3Q14802 87 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 CCDC144NLQ6NUI1 221 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 TRGV9Q99603 122 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
MSH5-211ENST00000463144 ZNF355PQ9NSJ1 428 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 CACNA1BQ00975 2339 aa8.06□□□□□ -1.12
MSH5-211ENST00000463144 C5orf52A6NGY3 159 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 PDLIM4P50479 330 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 UBE2E1P51965 193 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 ASPHD1Q5U4P2 390 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 NECAP1Q8NC96 275 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms