RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 GALNT14Q96FL9 552 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 ZNF414Q96IQ9 312 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 RNF2Q99496 336 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 PRRT1Q99946 306 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 SOSTQ9BQB4 213 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 C6orf62Q9GZU0 229 aaPredicted RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 NAA60Q9H7X0 242 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 CCDC59Q9P031 241 aaKnown RBP5.41□□□□□ -1.54
PTPRF-210ENST00000463041 SCP2D1Q9UJQ7 156 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 HYDINQ4G0P3 5121 aa5.41□□□□□ -1.54
PTPRF-210ENST00000463041 TRAV30A0A087WSZ9 112 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 A0A0G2JRQ6 117 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 A0A1W2PS18 150 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 ANKRD20A5PA0PJZ0 165 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 FABP12A6NFH5 140 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 CRYM-AS1A6NIL9 109 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 SPRY2O43597 315 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 CLN5O75503 358 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 SCGB2A1O75556 95 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 OR5AC1P0C628 307 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 NPPCP23582 126 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 HTR2BP41595 481 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 HOXA1P49639 335 aaPredicted RBP5.4□□□□□ -1.54
PTPRF-210ENST00000463041 MLANAQ16655 118 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 BSXQ3C1V8 233 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 ODF3L2Q3SX64 289 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 NOXA1Q86UR1 476 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 OR4C16Q8NGL9 310 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 OR4X1Q8NH49 305 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 GPR146Q96CH1 333 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM231Q9H6L2 316 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 VSIRQ9H7M9 311 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 MAP6D1Q9H9H5 199 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 UBQLN2Q9UHD9 624 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM56-RWDD3S4R434 201 aa5.4□□□□□ -1.54
PTPRF-210ENST00000463041 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 TRAV2A0A0B4J234 112 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 PIGBOS1A0A0B4J2F0 54 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 RPS10-NUDT3A0A1W2PQS6 291 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 DNASE2O00115 360 aaPredicted RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 NOL3O60936 208 aaKnown RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 DFFBO76075 338 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 ATF4P18848 351 aaPredicted RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 TNFSF8P32971 234 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 TNFRSF9Q07011 255 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 FAAP20Q6NZ36 180 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 TCF24Q7RTU0 167 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 OR51S1Q8NGJ8 323 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 LHFPL5Q8TAF8 219 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 RNASEH2CQ8TDP1 164 aaKnown RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 IL22RA2Q969J5 263 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM230Q96A57 120 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 RNF183Q96D59 192 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 SLIRPQ9GZT3 109 aaKnown RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 CSTL1Q9H114 145 aa5.39□□□□□ -1.55
PTPRF-210ENST00000463041 FNDC4Q9H6D8 234 aaPredicted RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 HEYLQ9NQ87 328 aaPredicted RBP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 PUS1Q9Y606 427 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPRF-210ENST00000463041 IGHV3OR16-13A0A075B7E8 117 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 IGHV3-74A0A0B4J1X5 117 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 H3BMQ9 156 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 JTBO76095 146 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 APOHP02749 345 aaPredicted RBP5.38□□□□□ -1.55
PTPRF-210ENST00000463041 SULT1A3P0DMM9 295 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 SULT1A4P0DMN0 295 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 SLC25A4P12235 298 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 RPL35AP18077 110 aaKnown RBP5.38□□□□□ -1.55
PTPRF-210ENST00000463041 CRYBB3P26998 211 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 OPRK1P41145 380 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 TFPI2P48307 235 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 ATP5IP56385 69 aaPredicted RBP5.38□□□□□ -1.55
PTPRF-210ENST00000463041 RPL11P62913 178 aaKnown RBP5.38□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM187Q14656 261 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM268Q5VZI3 342 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 ETFRF1Q6IPR1 90 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 APRG1Q8IVJ8 170 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 GBGT1Q8N5D6 347 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 MCFD2Q8NI22 146 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 Q8WTZ3 238 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 ST8SIA2Q92186 375 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 NARS2Q96I59 477 aaKnown RBP5.38□□□□□ -1.55
PTPRF-210ENST00000463041 METTL26Q96S19 204 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 MS4A6AQ9H2W1 248 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 CACNG5Q9UF02 275 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 U3KQ87 197 aa5.38□□□□□ -1.55
PTPRF-210ENST00000463041 IGKV3-7A0A075B6H7 116 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 A0A0B4J2A0 478 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 A0A0J9YWU9 116 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 A0A1B0GU03 582 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 CEBPZOSA8MTT3 80 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 MPTX1A8MV57 137 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 IGKV1-17P01599 117 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 ANXA3P12429 323 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms