RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 NPIPB11E5RHQ5 1161 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 APOMO95445 188 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 PPP1R17O96001 155 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 PYYP10082 97 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 LEPP41159 167 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 PSG7Q13046 419 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 C16orf92Q96LL3 132 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 A0A087X0K7 114 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 CDPF1Q6NVV7 123 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
SMC4-204ENST00000462787 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 NXT2Q9NPJ8 142 aaKnown RBP13.16□□□□□ -0.3
SMC4-204ENST00000462787 CYSLTR1Q9Y271 337 aa13.16□□□□□ -0.3
SMC4-204ENST00000462787 C16orf97H3BN30 126 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.15□□□□□ -0.3
SMC4-204ENST00000462787 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
SMC4-204ENST00000462787 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 ZIC4Q8N9L1 334 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 TSC2P49815 1807 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 SCGB3A1Q96QR1 104 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
SMC4-204ENST00000462787 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 ID1P41134 155 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 COPS9Q8WXC6 57 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
SMC4-204ENST00000462787 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
SMC4-204ENST00000462787 C5orf63A6NC05 138 aa13.15□□□□□ -0.31
SMC4-204ENST00000462787 Q6ZT83 130 aa13.15□□□□□ -0.31
SMC4-204ENST00000462787 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.31
SMC4-204ENST00000462787 KIR2DL4Q99706 377 aa13.15□□□□□ -0.31
SMC4-204ENST00000462787 Q6ZRM9 215 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 F2RL2O00254 374 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 IGLV3-19P01714 112 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 CKS1BP61024 79 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 GUSBP1Q15486 140 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 COQ2Q96H96 371 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 ZNF585BQ52M93 769 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
SMC4-204ENST00000462787 SAA1P0DJI8 122 aaPredicted RBP13.13□□□□□ -0.31
SMC4-204ENST00000462787 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 HOXA3O43365 443 aaPredicted RBP13.13□□□□□ -0.31
SMC4-204ENST00000462787 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
SMC4-204ENST00000462787 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 PLXNA3P51805 1871 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 IGKCP01834 107 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 GFRA1P56159 465 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 CDCP2Q5VXM1 449 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 SAP25Q8TEE9 199 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
SMC4-204ENST00000462787 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 FAM186AA6NE01 2351 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
SMC4-204ENST00000462787 PAX9P55771 341 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
SMC4-204ENST00000462787 HEATR5BQ9P2D3 2071 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 CSRP1P21291 193 aaKnown RBP13.12□□□□□ -0.31
SMC4-204ENST00000462787 KHDC1LQ5JSQ8 128 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 ZNF726P1Q15940 193 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 TSPAN13O95857 204 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 RPRMLQ8N4K4 120 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 FGFBP3Q8TAT2 258 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
SMC4-204ENST00000462787 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
SMC4-204ENST00000462787 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 FOXH1O75593 365 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 FOXL2NBQ6ZUU3 175 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 GTSF1LQ9H1H1 148 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 ZNF581Q9P0T4 197 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 TRAV8-2A0A0B4J237 113 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 NDUFA3O95167 84 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 FOXF2Q12947 444 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 MRPL14Q6P1L8 145 aaKnown RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 BEX4Q9NWD9 120 aaPredicted RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 SCGB1A1P11684 91 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 TMEM170BQ5T4T1 132 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 C1orf185Q5T7R7 199 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 C1orf162Q8NEQ5 155 aaPredicted RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 NAA38Q9BRA0 125 aaKnown RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 MRPL20Q9BYC9 149 aaKnown RBP13.11□□□□□ -0.31
SMC4-204ENST00000462787 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
SMC4-204ENST00000462787 NTF4P34130 210 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms