RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 S100A7P31151 101 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 BMI1P35226 326 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 BCAP31P51572 246 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 SLURP1P55000 103 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 TAS2R30P59541 319 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 POLR2GP62487 172 aaKnown RBP eCLIP4.92□□□□□ -1.62
SF3B1-206ENST00000462613 CD69Q07108 199 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 BSXQ3C1V8 233 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 C19orf35Q6ZS72 473 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 STX12Q86Y82 276 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 GPHB5Q86YW7 130 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 OR10P1Q8NGE3 313 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 OR4D5Q8NGN0 318 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 CACNG8Q8WXS5 425 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
SF3B1-206ENST00000462613 SMIM8Q96KF7 97 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 OR10C1Q96KK4 312 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 CCDC140Q96MF4 163 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 GINS3Q9BRX5 216 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 NMES1Q9C002 83 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 MGAT4CQ9UBM8 478 aa4.92□□□□□ -1.62
SF3B1-206ENST00000462613 IGHV3-21A0A0B4J1V1 117 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 PPP5D1E7EU14 171 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 H3BP45 60 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 I3L2K1 104 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 LGALS9O00182 355 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 BMPR1BO00238 502 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 NDUFA4O00483 81 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 SAP30O75446 220 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 CLN5O75503 358 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 YIF1AO95070 293 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 FCGR2BP31994 310 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-206ENST00000462613 GPX4P36969 197 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-206ENST00000462613 CAV2P51636 162 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 MFAP2P55001 183 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-206ENST00000462613 SYNJ2BPP57105 145 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 HBG1P69891 147 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 HBG2P69892 147 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 AKR1C1Q04828 323 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 LRRC37A5PQ49AS3 106 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 ZNF600Q6ZNG1 722 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 SLC16A13Q7RTY0 426 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 WFDC9Q8NEX5 89 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 OR9G4Q8NGQ1 327 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 OR4X1Q8NH49 305 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 DYNLRB2Q8TF09 96 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 ASB13Q8WXK3 278 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 DLX4Q92988 240 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-206ENST00000462613 MARC2Q969Z3 335 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 PFDN2Q9UHV9 154 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 RCL1Q9Y2P8 373 aaKnown RBP4.91□□□□□ -1.62
SF3B1-206ENST00000462613 UFC1Q9Y3C8 167 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 ALG5Q9Y673 324 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 NOTCH3Q9UM47 2321 aa4.91□□□□□ -1.62
SF3B1-206ENST00000462613 SMCO3A2RU48 225 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 ZFP92A6NM28 416 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 E5RGE8 158 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 K7EPK0 472 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 OR2C1O95371 312 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 TRBV12-3P01733 135 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 IGHV3-48P01763 117 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-206ENST00000462613 IGLL1P15814 213 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 SPNP16150 400 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 OR10J1P30954 320 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-206ENST00000462613 RND2P52198 227 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 RRAS2P62070 204 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-206ENST00000462613 FGL1Q08830 312 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 RAB31Q13636 194 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 RAB32Q13637 225 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-206ENST00000462613 OXA1LQ15070 435 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 PVRIGQ6DKI7 326 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 OR8G2PQ6IF36 304 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 REC114Q7Z4M0 266 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 S100A7AQ86SG5 101 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 LILRB2Q8N423 598 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM116Q8NCL8 245 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 OR1S2Q8NGQ3 325 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 THAP6Q8TBB0 222 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 Q8WTZ3 238 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 ACY3Q96HD9 319 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 C20orf24Q9BUV8 137 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 SLC25A31Q9H0C2 315 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM231Q9H6L2 316 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 DAZ1Q9NQZ3 744 aaKnown RBP4.9□□□□□ -1.63
SF3B1-206ENST00000462613 ZC4H2Q9NQZ6 224 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
SF3B1-206ENST00000462613 IGHV3-35A0A0C4DH35 117 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 A0A1W2PS18 150 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 C15orf62A8K5M9 175 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 A8MWP6 167 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 DEDDO75618 318 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 SIX6O95475 246 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM50AO95807 157 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 CFDP00746 253 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 CTSGP08311 255 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 METTL15P1P0C7V9 234 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms