RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 RPS10-NUDT3A0A1W2PQS6 291 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 OR4C46A6NHA9 309 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 ZNF701M0R085 212 aaPredicted RBP6.61□□□□□ -1.35
SYN3-207ENST00000462268 CTSGP08311 255 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 RNASE2P10153 161 aaKnown RBP6.61□□□□□ -1.35
SYN3-207ENST00000462268 ANXA3P12429 323 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 OPRK1P41145 380 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 ETV6P41212 452 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 PYDC2Q56P42 97 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 TMEM268Q5VZI3 342 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 PVRIGQ6DKI7 326 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 LINC00322Q6ZN03 302 aaPredicted RBP6.61□□□□□ -1.35
SYN3-207ENST00000462268 SELENOHQ8IZQ5 122 aaKnown RBP6.61□□□□□ -1.35
SYN3-207ENST00000462268 TOMM5Q8N4H5 51 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 LHFPL5Q8TAF8 219 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 TRIM63Q969Q1 353 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 OR10C1Q96KK4 312 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 WFDC10AQ9H1F0 79 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 CACNG5Q9UF02 275 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 TMEM56-RWDD3S4R434 201 aa6.61□□□□□ -1.35
SYN3-207ENST00000462268 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 STAB2Q8WWQ8 2551 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 IGHV7-4-1A0A0J9YVY3 117 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 RBMY1BA6NDE4 496 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 RBMY1EA6NEQ0 496 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 ZNF207O43670 478 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 CD5P06127 495 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 RBMY1DP0C7P1 496 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 HTR2BP41595 481 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 KLF9Q13886 244 aaPredicted RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 SPANXN2Q5MJ10 180 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 ZNF600Q6ZNG1 722 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 NOXA1Q86UR1 476 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 TMEM116Q8NCL8 245 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 TMEM230Q96A57 120 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 GPR146Q96CH1 333 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 GGTLC1Q9BX51 225 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 RBM38Q9H0Z9 239 aaKnown RBP6.6□□□□□ -1.35
SYN3-207ENST00000462268 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 SELENOKQ9Y6D0 94 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 V9GYH0 126 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
SYN3-207ENST00000462268 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
SYN3-207ENST00000462268 LOC102724200A0A096LPH7 203 aaPredicted RBP6.59□□□□□ -1.35
SYN3-207ENST00000462268 TRAV14DV4A0A0A6YYC5 116 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 A0A0B4J2A0 478 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 CEBPZOSA8MTT3 80 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 CHEK1O14757 476 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 CLN5O75503 358 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 IGHV3-48P01763 117 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 SULT1A3P0DMM9 295 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 SULT1A4P0DMN0 295 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 LYL1P12980 280 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 AKR1C4P17516 323 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 CCR6P51684 374 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 TMEM187Q14656 261 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 BSXQ3C1V8 233 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 Q6ZRM9 215 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 LGI3Q8N145 548 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 SLC24A4Q8NFF2 622 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 OR4X1Q8NH49 305 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 FAM110AQ9BQ89 295 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 SLC25A21Q9BQT8 299 aaPredicted RBP6.59□□□□□ -1.35
SYN3-207ENST00000462268 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 HIPK2Q9H2X6 1198 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 TMEM231Q9H6L2 316 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 EDA2RQ9HAV5 297 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 HEYLQ9NQ87 328 aaPredicted RBP6.59□□□□□ -1.35
SYN3-207ENST00000462268 SHPKQ9UHJ6 478 aa6.59□□□□□ -1.35
SYN3-207ENST00000462268 TRAV30A0A087WSZ9 112 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 DUXBA0A1W2PPF3 345 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 SLC25A4P12235 298 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 NPY1RP25929 384 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 APOC4P55056 127 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
SYN3-207ENST00000462268 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 SMCO1Q147U7 214 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 ZNF79Q15937 498 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 C2orf83Q53S99 150 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 TMEM128Q5BJH2 165 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 NMSQ5H8A3 153 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 ETFRF1Q6IPR1 90 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 TOMM20LQ6UXN7 152 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 TMED4Q7Z7H5 227 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 CCDC190Q86UF4 302 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 RNASEH2CQ8TDP1 164 aaKnown RBP6.58□□□□□ -1.36
SYN3-207ENST00000462268 NARS2Q96I59 477 aaKnown RBP6.58□□□□□ -1.36
SYN3-207ENST00000462268 ZNF414Q96IQ9 312 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 RNF2Q99496 336 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 FNDC4Q9H6D8 234 aaPredicted RBP6.58□□□□□ -1.36
SYN3-207ENST00000462268 RETNQ9HD89 108 aa6.58□□□□□ -1.36
SYN3-207ENST00000462268 PUS1Q9Y606 427 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYN3-207ENST00000462268 A0A1W2PS18 150 aa6.57□□□□□ -1.36
SYN3-207ENST00000462268 TMEM50AO95807 157 aa6.57□□□□□ -1.36
SYN3-207ENST00000462268 VAMP1P23763 118 aa6.57□□□□□ -1.36
SYN3-207ENST00000462268 INPP1P49441 399 aa6.57□□□□□ -1.36
SYN3-207ENST00000462268 SUPT4H1P63272 117 aaKnown RBP6.57□□□□□ -1.36
SYN3-207ENST00000462268 TNFRSF9Q07011 255 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms