RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ZNF221Q9UK13 617 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 ING4Q9UNL4 249 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 RPL36Q9Y3U8 105 aaKnown RBP3.32□□□□□ -1.88
COPS3-204ENST00000462236 LRRC42Q9Y546 428 aa3.32□□□□□ -1.88
COPS3-204ENST00000462236 TRBV6-6A0A0A6YYG2 114 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 A0A1B0GW64 132 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 ZNF705EA8MWA4 302 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 F8WDY8 70 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 H7C2Y5 167 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 DEFB4AO15263 64 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 DUSP14O95147 198 aaKnown RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 OCM2P0CE71 109 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 OCMP0CE72 109 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 INAFM2P0DMQ5 153 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 GTF2F2P13984 249 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 FUT3P21217 361 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 HLA-DMBP28068 263 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 ZNF93P35789 620 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 PRSS8Q16651 343 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 C1orf134Q5TEV5 83 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 DHFR2Q86XF0 187 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 SLC38A6Q8IZM9 456 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 SPAG16Q8N0X2 631 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 DRAXINQ8NBI3 349 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 CD300LFQ8TDQ1 290 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 NEK7Q8TDX7 302 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 GTSF1Q8WW33 167 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 SRSF12Q8WXF0 261 aaKnown RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 THRSPQ92748 146 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 GPER1Q99527 375 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 PDCD1LG2Q9BQ51 273 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 SCRT1Q9BWW7 348 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 RIBC2Q9H4K1 309 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 TMEM138Q9NPI0 162 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 PAK1IP1Q9NWT1 392 aaPredicted RBP3.31□□□□□ -1.88
COPS3-204ENST00000462236 TAS2R4Q9NYW5 299 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 KCNIP1Q9NZI2 227 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 PEX16Q9Y5Y5 336 aa3.31□□□□□ -1.88
COPS3-204ENST00000462236 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 E7EUB6 86 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 TSC22D2O75157 780 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 PDCD6O75340 191 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 OR2J3O76001 311 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 CRYGCP07315 174 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 APELAP0DMC3 54 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 CAMLGP49069 296 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 MNAT1P51948 309 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 CXCL6P80162 114 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 GPR176Q14439 515 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 C12orf74Q32Q52 190 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 SYS1Q8N2H4 156 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 OR8J1Q8NGP2 316 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 OR5AK2Q8NH90 309 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 ASB9Q96DX5 294 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 C4orf36Q96KX1 117 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 FAM192AQ9GZU8 254 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 SLC35D1Q9NTN3 355 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 ZNF257Q9Y2Q1 563 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 TNXBP22105 4242 aa3.3□□□□□ -1.88
COPS3-204ENST00000462236 IGLV2-18A0A075B6J9 118 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 IGKV1-6A0A0C4DH72 117 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 TCRBV3S1A0A5B6 114 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 J3QLW9 94 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 FAM107AO95990 144 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 APOA2P02652 100 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 MIFP14174 115 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 MGMTP16455 207 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 ZNF19P17023 458 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 POLR2IP36954 125 aaKnown RBP3.29□□□□□ -1.88
COPS3-204ENST00000462236 UBE2KP61086 200 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 MED21Q13503 144 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 RNF212Q495C1 297 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 SOHLH1Q5JUK2 328 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 GLT8D1Q68CQ7 371 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 CLEC19AQ6UXS0 136 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 C19orf35Q6ZS72 473 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 PRSS48Q7RTY5 328 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 APRG1Q8IVJ8 170 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 CDH26Q8IXH8 852 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 ACBD7Q8N6N7 88 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 OR4A5Q8NH83 315 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 IL1F10Q8WWZ1 152 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 ZNF184Q99676 751 aaPredicted RBP3.29□□□□□ -1.88
COPS3-204ENST00000462236 CHRDL1Q9BU40 450 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 GABARAPL3Q9BY60 117 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 GABARAPL1Q9H0R8 117 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 BANF2Q9H503 90 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 ZNF430Q9H8G1 570 aaPredicted RBP3.29□□□□□ -1.88
COPS3-204ENST00000462236 SLC2A9Q9NRM0 540 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 OR1A1Q9P1Q5 309 aa3.29□□□□□ -1.88
COPS3-204ENST00000462236 IGLV11-55A0A075B6I3 123 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 TRAV8-7A0A075B6U6 113 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 DEFB131BA0A096LNP1 70 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 TRBV7-1A0A0A6YYK4 115 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 DAPL1A0PJW8 107 aa3.28□□□□□ -1.88
COPS3-204ENST00000462236 OR4C46A6NHA9 309 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms