RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RPL5P46777 297 aaKnown RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 CMC4P56277 68 aaPredicted RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 SPCS3P61009 180 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 DHODHQ02127 395 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 BSXQ3C1V8 233 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 ZNF600Q6ZNG1 722 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 SELENOHQ8IZQ5 122 aaKnown RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 OR51S1Q8NGJ8 323 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 OR52E5Q8NH55 327 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 RBPMSQ93062 196 aaKnown RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 GALNT14Q96FL9 552 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 PRRT1Q99946 306 aa14.02□□□□□ -0.17
VARS-220ENST00000461874 C6orf62Q9GZU0 229 aaPredicted RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 FNDC4Q9H6D8 234 aaPredicted RBP14.02□□□□□ -0.17
VARS-220ENST00000461874 PUS1Q9Y606 427 aaKnown RBP eCLIP14.02□□□□□ -0.17
VARS-220ENST00000461874 CRYM-AS1A6NIL9 109 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 GSTZ1O43708 216 aaPredicted RBP14.01□□□□□ -0.17
VARS-220ENST00000461874 CD5P06127 495 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 RPL35AP18077 110 aaKnown RBP14.01□□□□□ -0.17
VARS-220ENST00000461874 BMI1P35226 326 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 TFPI2P48307 235 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 MLANAQ16655 118 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 GPR146Q96CH1 333 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 VSIRQ9H7M9 311 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 ZFAND3Q9H8U3 227 aa14.01□□□□□ -0.17
VARS-220ENST00000461874 MRPL36Q9P0J6 103 aaKnown RBP14.01□□□□□ -0.17
VARS-220ENST00000461874 IGKV3-7A0A075B6H7 116 aa14□□□□□ -0.17
VARS-220ENST00000461874 A0A1B0GU03 582 aa14□□□□□ -0.17
VARS-220ENST00000461874 ANKRD20A5PA0PJZ0 165 aa14□□□□□ -0.17
VARS-220ENST00000461874 CLN5O75503 358 aa14□□□□□ -0.17
VARS-220ENST00000461874 APOHP02749 345 aaPredicted RBP14□□□□□ -0.17
VARS-220ENST00000461874 OPRK1P41145 380 aa14□□□□□ -0.17
VARS-220ENST00000461874 DEFB135Q30KP9 77 aa14□□□□□ -0.17
VARS-220ENST00000461874 TCF24Q7RTU0 167 aa14□□□□□ -0.17
VARS-220ENST00000461874 LILRB2Q8N423 598 aa14□□□□□ -0.17
VARS-220ENST00000461874 GBGT1Q8N5D6 347 aa14□□□□□ -0.17
VARS-220ENST00000461874 OR4X1Q8NH49 305 aa14□□□□□ -0.17
VARS-220ENST00000461874 ST8SIA2Q92186 375 aa14□□□□□ -0.17
VARS-220ENST00000461874 SOSTQ9BQB4 213 aa14□□□□□ -0.17
VARS-220ENST00000461874 SLIRPQ9GZT3 109 aaKnown RBP14□□□□□ -0.17
VARS-220ENST00000461874 MAP6D1Q9H9H5 199 aa14□□□□□ -0.17
VARS-220ENST00000461874 RSL24D1Q9UHA3 163 aaKnown RBP14□□□□□ -0.17
VARS-220ENST00000461874 TMEM56-RWDD3S4R434 201 aa14□□□□□ -0.17
VARS-220ENST00000461874 H3BMQ9 156 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 HTR2BP41595 481 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 PAFAH1B2P68402 229 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 TMEM268Q5VZI3 342 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 RNF183Q96D59 192 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 CACNG5Q9UF02 275 aa13.99□□□□□ -0.17
VARS-220ENST00000461874 A0A0J9YWU9 116 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 NOL3O60936 208 aaKnown RBP13.98□□□□□ -0.17
VARS-220ENST00000461874 JTBO76095 146 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 TNFSF8P32971 234 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 TNFRSF9Q07011 255 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 ZNF124Q15973 351 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 HEYLQ9NQ87 328 aaPredicted RBP13.98□□□□□ -0.17
VARS-220ENST00000461874 SCP2D1Q9UJQ7 156 aa13.98□□□□□ -0.17
VARS-220ENST00000461874 IGHV3-66A0A0C4DH42 116 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 DFFBO76075 338 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 LYG2Q86SG7 212 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 SCGB3A2Q96PL1 93 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 MS4A6AQ9H2W1 248 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 KCNIP3Q9Y2W7 256 aa13.97□□□□□ -0.17
VARS-220ENST00000461874 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 FABP12A6NFH5 140 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 SCGB2A1O75556 95 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 IGKV1-17P01599 117 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 NPPCP23582 126 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 TMEM187Q14656 261 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 C2orf83Q53S99 150 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 MCFD2Q8NI22 146 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 IL22RA2Q969J5 263 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 CSTL1Q9H114 145 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 TMEM231Q9H6L2 316 aa13.96□□□□□ -0.17
VARS-220ENST00000461874 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.18
VARS-220ENST00000461874 TRAV30A0A087WSZ9 112 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 TRAV2A0A0B4J234 112 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 CEBPZOSA8MTT3 80 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 DNASE2O00115 360 aaPredicted RBP13.95□□□□□ -0.18
VARS-220ENST00000461874 CRYBB3P26998 211 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 EWSR1Q01844 656 aaKnown RBP eCLIP13.95□□□□□ -0.18
VARS-220ENST00000461874 TIGITQ495A1 244 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 SLC24A4Q8NFF2 622 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 RNASEH2CQ8TDP1 164 aaKnown RBP13.95□□□□□ -0.18
VARS-220ENST00000461874 METTL26Q96S19 204 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 PRR13Q9NZ81 148 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 CACFD1Q9UGQ2 172 aa13.95□□□□□ -0.18
VARS-220ENST00000461874 A0A1W2PS18 150 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 MPTX1A8MV57 137 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 SULT1A3P0DMM9 295 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 SULT1A4P0DMN0 295 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 RPL11P62913 178 aaKnown RBP13.94□□□□□ -0.18
VARS-220ENST00000461874 NMSQ5H8A3 153 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 PRSS54Q6PEW0 395 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 TMEM170AQ8WVE7 144 aa13.94□□□□□ -0.18
VARS-220ENST00000461874 ALMS1Q8TCU4 4167 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms