RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 OR4C46A6NHA9 309 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 CDS2O95674 445 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 TMEM50AO95807 157 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 TMBIM6P55061 237 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 MRPS10P82664 201 aaKnown RBP11.47□□□□□ -0.57
NUP50-213ENST00000461437 SSBP1Q04837 148 aaKnown RBP11.47□□□□□ -0.57
NUP50-213ENST00000461437 TMEM268Q5VZI3 342 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 ENY2Q9NPA8 101 aa11.47□□□□□ -0.57
NUP50-213ENST00000461437 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 ANKRD20A5PA0PJZ0 165 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 CRYM-AS1A6NIL9 109 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 CTDSPLO15194 276 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 ATG12O94817 140 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 OPRK1P41145 380 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 NPBWR1P48145 328 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 PMS2P11Q13670 270 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 PVRIGQ6DKI7 326 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 TCF24Q7RTU0 167 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 FAM24BQ8N5W8 94 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
NUP50-213ENST00000461437 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 DFFBO76075 338 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 TNFSF8P32971 234 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 TIGITQ495A1 244 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 ZNF600Q6ZNG1 722 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
NUP50-213ENST00000461437 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
NUP50-213ENST00000461437 SPRY2O43597 315 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 RPL5P46777 297 aaKnown RBP11.44□□□□□ -0.58
NUP50-213ENST00000461437 APOC4P55056 127 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 SPCS3P61009 180 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 LEMD1Q68G75 181 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 MCFD2Q8NI22 146 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 GINS3Q9BRX5 216 aa11.44□□□□□ -0.58
NUP50-213ENST00000461437 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
NUP50-213ENST00000461437 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.44□□□□□ -0.58
NUP50-213ENST00000461437 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 GSTZ1O43708 216 aaPredicted RBP11.43□□□□□ -0.58
NUP50-213ENST00000461437 NOL3O60936 208 aaKnown RBP11.43□□□□□ -0.58
NUP50-213ENST00000461437 CLN5O75503 358 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 AKR1C4P17516 323 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 SUB1P53999 127 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP50-213ENST00000461437 DHODHQ02127 395 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 TMEM187Q14656 261 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 SURF2Q15527 256 aaPredicted RBP11.43□□□□□ -0.58
NUP50-213ENST00000461437 STPG3Q8N7X2 389 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 GALNT14Q96FL9 552 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 PRRT1Q99946 306 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 SOSTQ9BQB4 213 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 MS4A6AQ9H2W1 248 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
NUP50-213ENST00000461437 CORTO00230 105 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 IGKV1-17P01599 117 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 RPL11P62913 178 aaKnown RBP11.42□□□□□ -0.58
NUP50-213ENST00000461437 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 RNF183Q96D59 192 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 BCL7BQ9BQE9 202 aa11.42□□□□□ -0.58
NUP50-213ENST00000461437 B3GALNT1O75752 331 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 RND2P52198 227 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 DEFB131AP59861 70 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 SUPT4H1P63272 117 aaKnown RBP11.41□□□□□ -0.58
NUP50-213ENST00000461437 RBMS2Q15434 407 aaKnown RBP11.41□□□□□ -0.58
NUP50-213ENST00000461437 AARDQ4LEZ3 155 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 Q6ZWC4 215 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 LYZL2Q7Z4W2 148 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 RSL24D1Q9UHA3 163 aaKnown RBP11.41□□□□□ -0.58
NUP50-213ENST00000461437 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
NUP50-213ENST00000461437 KIR2DL5BA0A0G2JN68 375 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 KIR2DL5BA0A0G2JPC4 375 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 CXorf65A6NEN9 183 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 CCDC160A6NGH7 325 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
NUP50-213ENST00000461437 BMI1P35226 326 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 HTR2BP41595 481 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 PRSS54Q6PEW0 395 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 KIR2DL5AQ8N109 375 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 KIR2DL5BQ8NHK3 375 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 V9GYH0 126 aa11.4□□□□□ -0.58
NUP50-213ENST00000461437 UBE2CO00762 179 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 JTBO76095 146 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 NPPCP23582 126 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 KLF9Q13886 244 aaPredicted RBP11.39□□□□□ -0.59
NUP50-213ENST00000461437 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms