RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CTRB2Q6GPI1 263 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 LYZL2Q7Z4W2 148 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 SLC35G3Q8N808 338 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 DMBX1Q8NFW5 382 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 OSR1Q8TAX0 266 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-202ENST00000461127 RRNAD1Q96FB5 475 aaKnown RBP12.72□□□□□ -0.37
TOP3A-202ENST00000461127 SPAG8Q99932 426 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-202ENST00000461127 MGAT4CQ9UBM8 478 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
TOP3A-202ENST00000461127 KRASP01116 189 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 IGKV1-39P01597 117 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 IGKV1D-39P04432 117 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 NQO2P16083 231 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
TOP3A-202ENST00000461127 G6PCP35575 357 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 FCN2Q15485 313 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 CADM3Q8N126 398 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
TOP3A-202ENST00000461127 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 HMX3A6NHT5 357 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 MARCH11A6NNE9 402 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 CCSO14618 274 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 ADAP1O75689 374 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 IGHV3-23P01764 117 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 BCAP31P51572 246 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 SSX9Q7RTT3 188 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 H2BFWTQ7Z2G1 175 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 RARRES2Q99969 163 aa12.7□□□□□ -0.38
TOP3A-202ENST00000461127 ZNF430Q9H8G1 570 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-202ENST00000461127 MRPL27Q9P0M9 148 aaKnown RBP12.7□□□□□ -0.38
TOP3A-202ENST00000461127 DBX1A6NMT0 343 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 IGLL5B9A064 214 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 SULT1A3P0DMM9 295 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 SULT1A4P0DMN0 295 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
TOP3A-202ENST00000461127 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
TOP3A-202ENST00000461127 EEF1AKMT3Q96AZ1 226 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 SEC22AQ96IW7 307 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 CCDC140Q96MF4 163 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 C11orf68Q9H3H3 251 aaKnown RBP12.69□□□□□ -0.38
TOP3A-202ENST00000461127 MAP6D1Q9H9H5 199 aa12.69□□□□□ -0.38
TOP3A-202ENST00000461127 PRSS29PA6NIE9 313 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 IGKV1-5P01602 117 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 TRAPPC2P0DI81 140 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 TRAPPC2BP0DI82 140 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 C8orf88P0DMB2 117 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 MYOD1P15172 320 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 FCGR2BP31994 310 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-202ENST00000461127 LAMTOR1Q6IAA8 161 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 TMEM140Q9NV12 185 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 APLNQ9ULZ1 77 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 FAT2Q9NYQ8 4349 aa12.68□□□□□ -0.38
TOP3A-202ENST00000461127 SIX6O95475 246 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 HLA-GP17693 338 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 MFAP2P55001 183 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 ELLP55199 621 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-202ENST00000461127 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 IAH1Q2TAA2 248 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-202ENST00000461127 C10orf55Q5SWW7 151 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 OR11H7Q8NGC8 314 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 VSTM2AQ8TAG5 236 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 S4R3C0 116 aa12.67□□□□□ -0.38
TOP3A-202ENST00000461127 NPIPB5A8MRT5 1133 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 TSPAN4O14817 238 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 SNAPC5O75971 98 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 SAA1P0DJI8 122 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-202ENST00000461127 CXCL3P19876 107 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 OR4A16Q8NH70 328 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 CSTL1Q9H114 145 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 GSKIPQ9P0R6 139 aa12.66□□□□□ -0.38
TOP3A-202ENST00000461127 TRBV7-1A0A0A6YYK4 115 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 A0A1B0GU03 582 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR4C46A6NHA9 309 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 MPTX1A8MV57 137 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 HIST1H1BP16401 226 aaKnown RBP12.65□□□□□ -0.38
TOP3A-202ENST00000461127 SMCO1Q147U7 214 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR5B3Q8NH48 314 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 CHAC2Q8WUX2 184 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR10C1Q96KK4 312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms