RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 NPIPB3Q92617 1050 aa19.24■□□□□ 0.67
U2AF1-204ENST00000459639 RCC1LQ96I51 464 aaKnown RBP19.24■□□□□ 0.67
U2AF1-204ENST00000459639 SLC45A2Q9UMX9 530 aa19.24■□□□□ 0.67
U2AF1-204ENST00000459639 IGHV4-59P01825 116 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 OR10J1P30954 320 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 CRIP2P52943 208 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-204ENST00000459639 B2MP61769 119 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRR20EP86478 221 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRR20CP86479 221 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRR20DP86480 221 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRR20BP86481 221 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRR20AP86496 221 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 UNQ5815/PRO19632Q6UWF5 114 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 RPP25LQ8N5L8 163 aaKnown RBP19.23■□□□□ 0.67
U2AF1-204ENST00000459639 STPG3Q8N7X2 389 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 PRDM13Q9H4Q3 707 aa19.23■□□□□ 0.67
U2AF1-204ENST00000459639 MRPL36Q9P0J6 103 aaKnown RBP19.23■□□□□ 0.67
U2AF1-204ENST00000459639 CELSR1Q9NYQ6 3014 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 BTBD17A6NE02 478 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 IGHV3-48P01763 117 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 HBE1P02100 147 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 ZNF726P1Q15940 193 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 Q6YL49 198 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 MBD3L1Q8WWY6 194 aa19.22■□□□□ 0.67
U2AF1-204ENST00000459639 TRAV1-1A0A0B4J248 108 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 YIF1AO95070 293 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 ECSCRQ19T08 205 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 AKIRIN2Q53H80 203 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 SPSB3Q6PJ21 355 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 FANCD2OSQ96PS1 177 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 TMUB1Q9BVT8 246 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 SLC39A9Q9NUM3 307 aa19.21■□□□□ 0.67
U2AF1-204ENST00000459639 K7EIM0 57 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 KLK9Q2XQG4 91 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 UQCC3Q6UW78 93 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 CYP2G1PQ6ZSU1 146 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 SFT2D1Q8WV19 159 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 ZNF48Q96MX3 618 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-204ENST00000459639 ACTR3CQ9C0K3 210 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-204ENST00000459639 THYN1Q9P016 225 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 KLK9Q9UKQ9 250 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 FLNAP21333 2647 aaKnown RBP19.2■□□□□ 0.66
U2AF1-204ENST00000459639 CTXND1A0A1B0GTU2 59 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 TCRBV4S1A1TA0A5B7 111 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 LINC01548A6NM66 108 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 LINC00869P0C866 280 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 HIST1H1BP16401 226 aaKnown RBP19.2■□□□□ 0.66
U2AF1-204ENST00000459639 OR5T1Q8NG75 326 aa19.2■□□□□ 0.66
U2AF1-204ENST00000459639 IGKV1D-37A0A075B6S9 117 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 ZFP92A6NM28 416 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 SEC14L6B5MCN3 397 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 IGHG2P01859 326 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 FAM122CQ6P4D5 195 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 SPNS3Q6ZMD2 512 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 SSX7Q7RTT5 188 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 BPIFCQ8NFQ6 507 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 OR4X1Q8NH49 305 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 SVEP1Q4LDE5 3571 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 CSMD1Q96PZ7 3565 aa19.19■□□□□ 0.66
U2AF1-204ENST00000459639 IGHV3-21A0A0B4J1V1 117 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 C9orf152Q5JTZ5 239 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 TRGV9Q99603 122 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 SLC25A22Q9H936 323 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 VPREB3Q9UKI3 123 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 TEX15Q9BXT5 2789 aa19.18■□□□□ 0.66
U2AF1-204ENST00000459639 MAP1LC3B2A6NCE7 125 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 IGF1P05019 195 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 CDC34P49427 236 aaPredicted RBP19.17■□□□□ 0.66
U2AF1-204ENST00000459639 SELENOTP62341 195 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 C19orf54Q5BKX5 351 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 GCSAMLQ5JQS6 135 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 SLC35E3Q7Z769 313 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 MAP1LC3BQ9GZQ8 125 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 I3L521 148 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 LCN15Q6UWW0 184 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 TNFRSF19Q9NS68 423 aa19.17■□□□□ 0.66
U2AF1-204ENST00000459639 TRAV41A0A0B4J266 112 aa19.16■□□□□ 0.66
U2AF1-204ENST00000459639 A0A1B0GV50 99 aa19.16■□□□□ 0.66
U2AF1-204ENST00000459639 RAB24Q969Q5 203 aa19.16■□□□□ 0.66
U2AF1-204ENST00000459639 FAM210AQ96ND0 272 aa19.16■□□□□ 0.66
U2AF1-204ENST00000459639 ANKRD34BA5PLL1 514 aa19.15■□□□□ 0.66
U2AF1-204ENST00000459639 G3V318 75 aa19.15■□□□□ 0.66
U2AF1-204ENST00000459639 A0A1W2PPV4 95 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 CLN5O75503 358 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 BLCAPP62952 87 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 CCL20P78556 96 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 IL17RELQ6ZVW7 336 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 YAE1D1Q9NRH1 226 aa19.14■□□□□ 0.66
U2AF1-204ENST00000459639 OR2J3O76001 311 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 IGLC1P0CG04 106 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 GATA2P23769 480 aaPredicted RBP19.14■□□□□ 0.65
U2AF1-204ENST00000459639 SRP14P37108 136 aaKnown RBP19.14■□□□□ 0.65
U2AF1-204ENST00000459639 ZNF90Q03938 601 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 TOR2AQ5JU69 321 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 PBDC1Q9BVG4 233 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 C19orf24Q9BVV8 132 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 ZNF580Q9UK33 172 aa19.14■□□□□ 0.65
U2AF1-204ENST00000459639 TRBV9A0A0B4J1U6 114 aa19.13■□□□□ 0.65
U2AF1-204ENST00000459639 HOXA3O43365 443 aaPredicted RBP19.13■□□□□ 0.65
U2AF1-204ENST00000459639 NDUFB8O95169 186 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms