RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CD69Q07108 199 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 DEFB136Q30KP8 78 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
TRIM39-211ENST00000458516 MRPL36Q9P0J6 103 aaKnown RBP13□□□□□ -0.33
TRIM39-211ENST00000458516 ANKRD34BA5PLL1 514 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 P2RY1P47900 373 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
TRIM39-211ENST00000458516 RANGRFQ9HD47 186 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-211ENST00000458516 WNK1Q9H4A3 2382 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 A0A087WW49 117 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 FCGR2BP31994 310 aaPredicted RBP12.98□□□□□ -0.33
TRIM39-211ENST00000458516 MFAP4P55083 255 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 FGL1Q08830 312 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 ARL16Q0P5N6 197 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 OR8G2PQ6IF36 304 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 ETFRF1Q6IPR1 90 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 ACSM6Q6P461 480 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 THAP6Q8TBB0 222 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 ST6GAL2Q96JF0 529 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
TRIM39-211ENST00000458516 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
TRIM39-211ENST00000458516 SMLR1H3BR10 107 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 BMPR1BO00238 502 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
TRIM39-211ENST00000458516 SLC25A4P12235 298 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 GPR183P32249 361 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 GPX4P36969 197 aaPredicted RBP12.97□□□□□ -0.33
TRIM39-211ENST00000458516 FHL3Q13643 280 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 Q56UQ5 140 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 FAM209BQ5JX69 171 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 ACOT7LQ6ZUV0 252 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 DCUN1D4Q92564 292 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 TXN2Q99757 166 aa12.97□□□□□ -0.33
TRIM39-211ENST00000458516 OR2T8A6NH00 312 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 PPP5D1E7EU14 171 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 CST7O76096 145 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 CLEC3BP05452 202 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 SULT1A1P50225 295 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 RND2P52198 227 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIM39-211ENST00000458516 UBAC2Q8NBM4 344 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 TMEM116Q8NCL8 245 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 OR10P1Q8NGE3 313 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 CACNG8Q8WXS5 425 aa12.96□□□□□ -0.33
TRIM39-211ENST00000458516 LINC01619G3V211 115 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 CCL24O00175 119 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 TGOLN2O43493 480 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 CLN5O75503 358 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 TSPAN15O95858 294 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 ARL3P36405 182 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 NPBWR1P48145 328 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 DLK1P80370 383 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 ZNF616Q08AN1 781 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 GAMTQ14353 236 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 STX12Q86Y82 276 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 BSCL2Q96G97 398 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-211ENST00000458516 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 OR4F4Q96R69 305 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 SLC25A31Q9H0C2 315 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
TRIM39-211ENST00000458516 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
TRIM39-211ENST00000458516 M0QZ24 198 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 GNG7O60262 68 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 SCAF4O95104 1147 aaKnown RBP12.94□□□□□ -0.34
TRIM39-211ENST00000458516 ADMP35318 185 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 MYCNOSP40205 109 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 NHLH2Q02577 135 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 SLC38A11Q08AI6 406 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 TMEM217Q8N7C4 229 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 NPIPB3Q92617 1050 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 ACY3Q96HD9 319 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 ZNF414Q96IQ9 312 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 CHRDL1Q9BU40 450 aa12.94□□□□□ -0.34
TRIM39-211ENST00000458516 FBN3Q75N90 2809 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 FXYD6-FXYD2A0A087WZ82 144 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 CTSGP08311 255 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 IGLC1P0CG04 106 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 RPL12P30050 165 aaKnown RBP12.93□□□□□ -0.34
TRIM39-211ENST00000458516 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-211ENST00000458516 SLURP1P55000 103 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 BAXQ07812 192 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 SPSB3Q6PJ21 355 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 TCTE3Q8IZS6 198 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 DPF1Q92782 380 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 HSPB11Q9Y547 144 aa12.93□□□□□ -0.34
TRIM39-211ENST00000458516 FNDC10F2Z333 226 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms