RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 KMT2AQ03164 3969 aa11.66□□□□□ -0.54
CHCHD3-204ENST00000457942 CORTO00230 105 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 SCGB2A1O75556 95 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 DEDDO75618 318 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 OPRK1P41145 380 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 ETV6P41212 452 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 MRPS10P82664 201 aaKnown RBP11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 TCF24Q7RTU0 167 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 TERB2Q8NHR7 220 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 MARCH1Q8TCQ1 289 aa11.65□□□□□ -0.54
CHCHD3-204ENST00000457942 KIAA1109Q2LD37 5005 aa11.65□□□□□ -0.55
CHCHD3-204ENST00000457942 A0A0B4J293 547 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 IGHV3-66A0A0C4DH42 116 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 NUPR2A6NF83 97 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 DNASE2O00115 360 aaPredicted RBP11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 CTDSPLO15194 276 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 CD74P04233 296 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 S100A5P33763 92 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 ZNF124Q15973 351 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 PYDC2Q56P42 97 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 RNF183Q96D59 192 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHCHD3-204ENST00000457942 TEX13DA0A0J9YY54 714 aaPredicted RBP11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 DISC1C4P0D8 188 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 ZNF701M0R085 212 aaPredicted RBP11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 OR5AC1P0C628 307 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 P0C879 139 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 UCP1P25874 307 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 MEF2DQ14814 521 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 SOSTQ9BQB4 213 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 V9GYH0 126 aa11.63□□□□□ -0.55
CHCHD3-204ENST00000457942 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 B3GALNT1O75752 331 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 CD5P06127 495 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 AKAIN1P0CW23 69 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 RNASE2P10153 161 aaKnown RBP11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 SSBP1Q04837 148 aaKnown RBP11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 ZNF79Q15937 498 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
CHCHD3-204ENST00000457942 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 GSTZ1O43708 216 aaPredicted RBP11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 DFFBO76075 338 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM50AO95807 157 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 EWSR1Q01844 656 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM230Q96A57 120 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 NARS2Q96I59 477 aaKnown RBP11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 METTL26Q96S19 204 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM222Q9H0R3 208 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 NAA60Q9H7X0 242 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 MCUBQ9NWR8 336 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 RABL2AQ9UBK7 228 aaPredicted RBP11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 RABL2BQ9UNT1 228 aa11.61□□□□□ -0.55
CHCHD3-204ENST00000457942 A0A1W2PS18 150 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 ANKRD20A5PA0PJZ0 165 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 CLN5O75503 358 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 NPPCP23582 126 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 SPCS3P61009 180 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 FAM90A2PQ658T7 463 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 FAM219AQ8IW50 185 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 OR51S1Q8NGJ8 323 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 TRIM63Q969Q1 353 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 MS4A6AQ9H2W1 248 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 HEYLQ9NQ87 328 aaPredicted RBP11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 KLK5Q9Y337 293 aaPredicted RBP11.6□□□□□ -0.55
CHCHD3-204ENST00000457942 A0A1B0GU03 582 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 RPS10-NUDT3A0A1W2PQS6 291 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 DEFB131AP59861 70 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 DHODHQ02127 395 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 LEMD1Q68G75 181 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 CEMP1Q6PRD7 247 aaPredicted RBP11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 RARRES2Q99969 163 aa11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 FNDC4Q9H6D8 234 aaPredicted RBP11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 MRPL36Q9P0J6 103 aaKnown RBP11.59□□□□□ -0.55
CHCHD3-204ENST00000457942 NXPH3O95157 252 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 CDS2O95674 445 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms