RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PRH1P02810 166 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 AMY1AP04745 511 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 REG1AP05451 166 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 RPL29P47914 159 aaKnown RBP7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 CAMLGP49069 296 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 RAB2AP61019 212 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 RPL15P61313 204 aaKnown RBP7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 RUNX1Q01196 453 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 GAMTQ14353 236 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 ACOT6Q3I5F7 207 aaPredicted RBP7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 TMEM41BQ5BJD5 291 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 FAM74A1Q5RGS3 127 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 PXDC1Q5TGL8 231 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 SLC35E3Q7Z769 313 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 THAP8Q8NA92 274 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 OR4X1Q8NH49 305 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 RSG1Q9BU20 258 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 GGTLC1Q9BX51 225 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 NPFFR1Q9GZQ6 430 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 YAE1D1Q9NRH1 226 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 GAR1Q9NY12 217 aaKnown RBP7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 PFDN2Q9UHV9 154 aa7.03□□□□□ -1.28
CDC42EP3-204ENST00000457889 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 TRAV41A0A0B4J266 112 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 CLDN34H7C241 214 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 I3L2K1 104 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 AGPAT2O15120 278 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 HBE1P02100 147 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 EGR2P11161 476 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 M6PRP20645 277 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 FCGR2BP31994 310 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 NPBWR1P48145 328 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 LY6EQ16553 131 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 C19orf54Q5BKX5 351 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 IL34Q6ZMJ4 242 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 TMEM182Q6ZP80 229 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 BCL6BQ8N143 479 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 NECAP1Q8NC96 275 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 LYPD6BQ8NI32 183 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 VN1R17PQ8TDU5 208 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 CXorf58Q96LI9 332 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 TRGV9Q99603 122 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 MGST2Q99735 147 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 TXN2Q99757 166 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 FNDC4Q9H6D8 234 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 CDC42EP3Q9UKI2 254 aa7.02□□□□□ -1.29
CDC42EP3-204ENST00000457889 ACANP16112 2415 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 NBPF19A0A087WUL8 3843 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 SCO2A0A1W2PP80 73 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 TCRBV4S1A1TA0A5B7 111 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 TMEM89A2RUT3 159 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FAM223BA6NKX1 122 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 SEC14L6B5MCN3 397 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 K7EIM0 57 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 MT-CO2P00403 227 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 RND2P52198 227 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 MFAP2P55001 183 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 B2MP61769 119 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FFAR4Q5NUL3 377 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 Q6ZRG5 221 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 S100A7AQ86SG5 101 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FAM223AQ8IWN6 122 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 EIF4E3Q8N5X7 224 aaKnown RBP7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FAM213BQ8TBF2 198 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 ACY3Q96HD9 319 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 RNF2Q99496 336 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 FAM103A1Q9BTL3 118 aaKnown RBP7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 SLC45A2Q9UMX9 530 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
CDC42EP3-204ENST00000457889 SONP18583 2426 aaKnown RBP7□□□□□ -1.29
CDC42EP3-204ENST00000457889 CTXND1A0A1B0GTU2 59 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 ZFP92A6NM28 416 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 HOXA3O43365 443 aaPredicted RBP7□□□□□ -1.29
CDC42EP3-204ENST00000457889 CLN5O75503 358 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 APELAP0DMC3 54 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 TAGLN2P37802 199 aaKnown RBP7□□□□□ -1.29
CDC42EP3-204ENST00000457889 MFAP4P55083 255 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 ZNF616Q08AN1 781 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 ECSCRQ19T08 205 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 UQCC3Q6UW78 93 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 CYP2G1PQ6ZSU1 146 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 STPG3Q8N7X2 389 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 NPIPB3Q92617 1050 aa7□□□□□ -1.29
CDC42EP3-204ENST00000457889 USMG5Q96IX5 58 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms