RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 IFNA7P01567 189 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SULT1A2P50226 295 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 RND2P52198 227 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 CRIP2P52943 208 aaPredicted RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 CCL20P78556 96 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 ERHP84090 104 aaKnown RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 CFHR3Q02985 330 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 AANATQ16613 207 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 MORN5Q5VZ52 161 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SPATA31B1PQ5VZV4 182 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SLC25A24Q6NUK1 477 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SPSB3Q6PJ21 355 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 UNQ5815/PRO19632Q6UWF5 114 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 CENPVQ7Z7K6 275 aaPredicted RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 TTC9CQ8N5M4 171 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 OR1P1Q8NH06 330 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SGMS2Q8NHU3 365 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 ACY3Q96HD9 319 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 SCRT1Q9BWW7 348 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 RPRMQ9NS64 109 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
RIF1-208ENST00000457745 FLNBO75369 2602 aaKnown RBP6.82□□□□□ -1.32
RIF1-208ENST00000457745 PSMB11A5LHX3 300 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 DNAJC9-AS1A6NH13 148 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 NPIPB5A8MRT5 1133 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 DFFBO76075 338 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 IGHG2P01859 326 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 SEC11BP0C7V7 166 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 OR10J1P30954 320 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 SNCAP37840 140 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 OPRK1P41145 380 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 RAB11AP62491 216 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 HBG1P69891 147 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 HBG2P69892 147 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 ZNF90Q03938 601 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 Q6ZRG5 221 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 FAM110DQ8TAY7 271 aaPredicted RBP6.81□□□□□ -1.32
RIF1-208ENST00000457745 NPIPB3Q92617 1050 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 KLK15Q9H2R5 256 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 C1RLQ9NZP8 487 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 VPREB3Q9UKI3 123 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 SLC45A2Q9UMX9 530 aa6.81□□□□□ -1.32
RIF1-208ENST00000457745 TRAV41A0A0B4J266 112 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 LINC00862A6NCI5 91 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 INAFM1C9JVW0 142 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 AGPAT2O15120 278 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 HMGB3O15347 200 aaKnown RBP6.8□□□□□ -1.32
RIF1-208ENST00000457745 IFNA5P01569 189 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 IGKV1-17P01599 117 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 C4BPBP20851 252 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
RIF1-208ENST00000457745 AKR1C1Q04828 323 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 ZNF266Q14584 549 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 ATP6V1FQ16864 119 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 KLK9Q2XQG4 91 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 TIGITQ495A1 244 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 PXDC1Q5TGL8 231 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 RPP25LQ8N5L8 163 aaKnown RBP6.8□□□□□ -1.32
RIF1-208ENST00000457745 STPG3Q8N7X2 389 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
RIF1-208ENST00000457745 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 MS4A10Q96PG2 267 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 SRSF8Q9BRL6 282 aaKnown RBP6.8□□□□□ -1.32
RIF1-208ENST00000457745 KLK9Q9UKQ9 250 aa6.8□□□□□ -1.32
RIF1-208ENST00000457745 TRBV9A0A0B4J1U6 114 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 ZNF705EA8MWA4 302 aaPredicted RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 C9JQL5 133 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 ATP6V1G1O75348 118 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 TRBV12-3P01733 135 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 IGLC1P0CG04 106 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 ADMP35318 185 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 GPX4P36969 197 aaPredicted RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 SRP14P37108 136 aaKnown RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 BPIFB3P59826 476 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 RPP30P78346 268 aaKnown RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 KIAA0141Q14154 515 aaPredicted RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 FFAR4Q5NUL3 377 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 PATE2Q6UY27 113 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 COMMD7Q86VX2 200 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 BPIFCQ8NFQ6 507 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 FAM213BQ8TBF2 198 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 GATAD1Q8WUU5 269 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 RCC1LQ96I51 464 aaKnown RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 PSMG3Q9BT73 122 aaPredicted RBP6.79□□□□□ -1.32
RIF1-208ENST00000457745 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 SLC25A22Q9H936 323 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 FBXL7Q9UJT9 491 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 PXMP4Q9Y6I8 212 aa6.79□□□□□ -1.32
RIF1-208ENST00000457745 F8P00451 2351 aa6.78□□□□□ -1.32
RIF1-208ENST00000457745 FNDC10F2Z333 226 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms