RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
VEGFA-210ENST00000457104 PRRT1Q99946 306 aa9.16□□□□□ -0.94
VEGFA-210ENST00000457104 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
VEGFA-210ENST00000457104 C6orf62Q9GZU0 229 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-210ENST00000457104 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-210ENST00000457104 HYDINQ4G0P3 5121 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 DNAH1Q9P2D7 4330 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 CORTO00230 105 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
VEGFA-210ENST00000457104 DHODHQ02127 395 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 ZNF124Q15973 351 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 ZNF600Q6ZNG1 722 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 Q6ZWC4 215 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 WFDC3Q8IUB2 231 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 OR52E5Q8NH55 327 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
VEGFA-210ENST00000457104 IL17DQ8TAD2 202 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 ST8SIA2Q92186 375 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 GPR146Q96CH1 333 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 CACNG5Q9UF02 275 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
VEGFA-210ENST00000457104 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
VEGFA-210ENST00000457104 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 AGRNO00468 2067 aa9.15□□□□□ -0.94
VEGFA-210ENST00000457104 FABP12A6NFH5 140 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 APOC4P55056 127 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 TMEM187Q14656 261 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 APRG1Q8IVJ8 170 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 OR4X1Q8NH49 305 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 GALNT14Q96FL9 552 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 GINS3Q9BRX5 216 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 ENY2Q9NPA8 101 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
VEGFA-210ENST00000457104 IGKV3-7A0A075B6H7 116 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 UBE2CO00762 179 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 SPRY2O43597 315 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 CLN5O75503 358 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
VEGFA-210ENST00000457104 OPRK1P41145 380 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 HTR2BP41595 481 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 TFPI2P48307 235 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
VEGFA-210ENST00000457104 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.953e-7■■■□□ 16.8
VEGFA-210ENST00000457104 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 TCF24Q7RTU0 167 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 MAP6D1Q9H9H5 199 aa9.13□□□□□ -0.95
VEGFA-210ENST00000457104 IGHV3-66A0A0C4DH42 116 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 DFFBO76075 338 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 C2orf83Q53S99 150 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 TRIM63Q969Q1 353 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 RNF183Q96D59 192 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 HEYLQ9NQ87 328 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-210ENST00000457104 SCP2D1Q9UJQ7 156 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 KCNIP3Q9Y2W7 256 aa9.12□□□□□ -0.95
VEGFA-210ENST00000457104 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
VEGFA-210ENST00000457104 A0A0J9YWU9 116 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 NOL3O60936 208 aaKnown RBP9.11□□□□□ -0.95
VEGFA-210ENST00000457104 NXPH3O95157 252 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 CD5P06127 495 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 NPPCP23582 126 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 CRYBB3P26998 211 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 BMI1P35226 326 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-210ENST00000457104 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 KLF9Q13886 244 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-210ENST00000457104 TIGITQ495A1 244 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 PRSS54Q6PEW0 395 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 LYZL2Q7Z4W2 148 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 LYG2Q86SG7 212 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 MS4A6AQ9H2W1 248 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 MCUBQ9NWR8 336 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 V9GYH0 126 aa9.11□□□□□ -0.95
VEGFA-210ENST00000457104 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 AKR1C4P17516 323 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 ZNF79Q15937 498 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
VEGFA-210ENST00000457104 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 U3KQE9 123 aa9.1□□□□□ -0.95
VEGFA-210ENST00000457104 ALMS1Q8TCU4 4167 aa9.09□□□□□ -0.95
VEGFA-210ENST00000457104 TRAV30A0A087WSZ9 112 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms