RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 YTHDF2Q9Y5A9 579 aaKnown RBP9.76□□□□□ -0.85
SMPD4-213ENST00000454468 PDE6DO43924 150 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 HOXA5P20719 270 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 TAS2R45P59539 299 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 MMDQ15546 238 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 TPPP3Q9BW30 176 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 SAMD10Q9BYL1 202 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 ZNF355PQ9NSJ1 428 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV3OR16-8A0A075B7F1 116 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 PPIAL4CA0A0B4J2A2 164 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 PPIAL4GP0DN37 164 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 CBLN1P23435 193 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 NPPCP23582 126 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 LYZP61626 148 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 ZNF430Q9H8G1 570 aaPredicted RBP9.76□□□□□ -0.85
SMPD4-213ENST00000454468 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 ELOVL5Q9NYP7 299 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 A0A087WWC5 75 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 MPDU1O75352 247 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 APOBEC3AP31941 199 aaPredicted RBP9.75□□□□□ -0.85
SMPD4-213ENST00000454468 LINC00479Q96M42 142 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 TECRQ9NZ01 308 aaKnown RBP9.75□□□□□ -0.85
SMPD4-213ENST00000454468 CTSZQ9UBR2 303 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 E7EUB6 86 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 FCN1O00602 326 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.851e-7■■■■■ 154.7
SMPD4-213ENST00000454468 CA1P00915 261 aaPredicted RBP9.75□□□□□ -0.85
SMPD4-213ENST00000454468 FOLR2P14207 255 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 Q5PR19 223 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 SLC25A48Q6ZT89 311 aaKnown RBP9.75□□□□□ -0.85
SMPD4-213ENST00000454468 OR8I2Q8N0Y5 310 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 RITA1Q96K30 269 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 CTDSP1Q9GZU7 261 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
SMPD4-213ENST00000454468 WASHC3Q9Y3C0 194 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 SIAH2O43255 324 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 CD33P20138 364 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM170AQ8WVE7 144 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 POLQO75417 2590 aa9.75□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV2-5P01817 119 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 CDKN1AP38936 164 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 DLEU1O43261 78 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 CFHR2P36980 270 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 CAMPP49913 170 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
SMPD4-213ENST00000454468 C10orf113Q5VZT2 155 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 SLC25A5P05141 298 aaKnown RBP9.74□□□□□ -0.85
SMPD4-213ENST00000454468 P0C879 139 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 RPL27AP46776 148 aaKnown RBP9.74□□□□□ -0.85
SMPD4-213ENST00000454468 LINC01551Q86U37 167 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 TIMD4Q96H15 378 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
SMPD4-213ENST00000454468 H0YJW9 148 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 NTF3P20783 257 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 UBE2G1P62253 170 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 PRCDQ00LT1 54 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 VSTM2AQ8TAG5 236 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 UBTD1Q9HAC8 227 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 RPLP1P05386 114 aaKnown RBP9.73□□□□□ -0.85
SMPD4-213ENST00000454468 STAG3L2P0CL84 134 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 STAG3L3P0CL85 134 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 GATA4P43694 442 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 PRRX1P54821 245 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 KLRD1Q13241 179 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
SMPD4-213ENST00000454468 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 DIRC2Q96SL1 478 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 AREGP15514 252 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 GNG5P63218 68 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 KLF17Q5JT82 389 aaPredicted RBP9.73□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM14BQ9NUH8 114 aa9.73□□□□□ -0.85
SMPD4-213ENST00000454468 FOXA2Q9Y261 457 aaPredicted RBP9.73□□□□□ -0.85
SMPD4-213ENST00000454468 SNURFLB1AK76 121 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV3-23P01764 117 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-213ENST00000454468 PPOXP50336 477 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 TMPRSS3P57727 454 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 ASCL2Q99929 193 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 SLC25A33Q9BSK2 321 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 COL25A1Q9BXS0 654 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-213ENST00000454468 DNAJC4Q9NNZ3 241 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 RNF24Q9Y225 148 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 TET2Q6N021 2002 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-213ENST00000454468 AARDQ4LEZ3 155 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 OSR1Q8TAX0 266 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-213ENST00000454468 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
SMPD4-213ENST00000454468 K7ENP7 123 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 DLL1O00548 723 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 NBL1P41271 181 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.71□□□□□ -0.85
SMPD4-213ENST00000454468 NUP37Q8NFH4 326 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms