RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 DCAF16Q9NXF7 216 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 RPUSD1Q9UJJ7 312 aaKnown RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 SIAH2O43255 324 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 HSBP1O75506 76 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 STPG4Q8N801 248 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 PAXXQ9BUH6 204 aa12.78□□□□□ -0.36
TRA2B-205ENST00000453386 MRPL32Q9BYC8 188 aaKnown RBP12.78□□□□□ -0.36
TRA2B-205ENST00000453386 GPR6P46095 362 aaPredicted RBP12.77□□□□□ -0.36
TRA2B-205ENST00000453386 CAMPP49913 170 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 PRR31Q5SQ13 230 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 STUMQ69YW2 141 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 C19orf35Q6ZS72 473 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 BET1LQ9NYM9 111 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 ZFP30Q9Y2G7 519 aa12.77□□□□□ -0.36
TRA2B-205ENST00000453386 DLL1O00548 723 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 PLAUP00749 431 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 LINC00614P0C842 121 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 ATP5IP56385 69 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-205ENST00000453386 TNXAQ16473 311 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 SPACA3Q8IXA5 215 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 FAM169BQ8N8A8 192 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 SSBP4Q9BWG4 385 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-205ENST00000453386 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
TRA2B-205ENST00000453386 COLQQ9Y215 455 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-205ENST00000453386 LAMTOR2Q9Y2Q5 125 aa12.77□□□□□ -0.37
TRA2B-205ENST00000453386 E7EUB6 86 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 SELENOVP59797 346 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
TRA2B-205ENST00000453386 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 NUP35Q8NFH5 326 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 PEX7O00628 323 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 TCF21O43680 179 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 APOA2P02652 100 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 TBR1Q16650 682 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 SEM1Q6ZVN7 128 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 CACNG8Q8WXS5 425 aa12.76□□□□□ -0.37
TRA2B-205ENST00000453386 M0R2Z0 102 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 CRYABP02511 175 aaKnown RBP12.75□□□□□ -0.37
TRA2B-205ENST00000453386 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 RNASEKQ6P5S7 137 aaKnown RBP12.75□□□□□ -0.37
TRA2B-205ENST00000453386 NDUFA4L2Q9NRX3 87 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 IGHV1-46P01743 117 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 REG1AP05451 166 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 ROS1P08922 2347 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 Q56UQ5 140 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 TIMM23BQ5SRD1 257 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 ZNF474Q6S9Z5 364 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-205ENST00000453386 hADV38S2A0JD32 116 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 GNG5P63218 68 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 C10orf55Q5SWW7 151 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 ZNF788Q6ZQV5 615 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 OSR1Q8TAX0 266 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-205ENST00000453386 GRAMD2BQ96HH9 432 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
TRA2B-205ENST00000453386 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
TRA2B-205ENST00000453386 WT1P19544 449 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-205ENST00000453386 GATA4P43694 442 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
TRA2B-205ENST00000453386 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 HIGD1CA8MV81 97 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 TM4SF5O14894 197 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 SFTPCP11686 197 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-205ENST00000453386 BLNKQ8WV28 456 aa12.74□□□□□ -0.37
TRA2B-205ENST00000453386 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
TRA2B-205ENST00000453386 FNDC4Q9H6D8 234 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-205ENST00000453386 IGLV3-9A0A075B6K5 115 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 CORTO00230 105 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 PATE2Q6UY27 113 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 LHFPL4Q7Z7J7 247 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 RPRMLQ8N4K4 120 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 OR1L4Q8NGR5 311 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 MBD6Q96DN6 1003 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 PPP1R14DQ9NXH3 145 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 FAM181BA6NEQ2 426 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 TNFSF4P23510 183 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 BPIFB3P59826 476 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 UBE2G1P62253 170 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 CCL8P80075 99 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 WIPF2Q8TF74 440 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-205ENST00000453386 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-205ENST00000453386 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
TRA2B-205ENST00000453386 CCL3L1P16619 93 aa12.72□□□□□ -0.37
TRA2B-205ENST00000453386 RELQ04864 619 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-205ENST00000453386 WT1-ASQ06250 92 aa12.72□□□□□ -0.37
TRA2B-205ENST00000453386 PMCHL1Q16048 86 aa12.72□□□□□ -0.37
TRA2B-205ENST00000453386 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
TRA2B-205ENST00000453386 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms